G112622


Basic Information

Item Value
gene id G112622
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10443815 ~ 10444661 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU128578
tgtctagttaaaccccatcatcctcagtaaagttgtttaaccaccaccatatgtctgtgtctagttaaaccctatcatcctcagtaaagttgtttaaccaccaccatatgtctgtgtctagttaaaccccatcatcctcagtaaagttgtttaaccaccaccatatgtctgtgtctagttaaaccccatcatcctcagtaaagttgtttaaccaccaccatatgtctagttaaaccccatcatcctcagtaaagttgtttaaccaccaccatatgtctgtgtctagttaaaccccatcatcctcagtaaagttgtttaaccaccaccatatgtctgtgtctagttaaaccccatcatcctcagtaaagttgtttaaccaccaccatatgtctgtgtctagttaaaccccatcatcctcagtaaagttgtttaaccaccatatgtctgtgtctagttaaaccccatcatcctcagtaaagttgtttaaccaccaccatatgtctagttaaaccccatcatcctcagtaaagttgtttaaccaccatatgtctgtgtctagttaaaccccatcatcctcagtaaagatgtttaaccaccatatgtctgtgtctagttaaaccccatcatcctcagtaaagttgtttaaccaccactatatgtctgtgtctagttaaaccccatcatcctcagtaaagttgtttaaccaccaccatatgtctagttaaaccccatcatcctcagtaaagttgtttaaccaccactatatgtctgtgtctagttaaaccccatcatcctcagtaaagttgtttaaccaccatatgtctgtgtctagttaaaccccatcatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128578 True 847 lncRNA 0.39 1 10443815 10444661

Neighbor

gene id symbol gene type direction distance location
LOC110535244 ctnnb1 coding upstream 41170 10366101 ~ 10402645 (+)
LOC110507415 LOC106584755 coding upstream 147223 10293799 ~ 10296592 (+)
LOC110517641 LOC106584755 coding upstream 205436 10235740 ~ 10238379 (+)
LOC118937668 LOC106584755 coding upstream 224243 10217269 ~ 10219572 (+)
LOC110507434 LOC106584755 coding upstream 254700 10186105 ~ 10189115 (+)
LOC110507508 LOC106605488 coding downstream 181925 10626586 ~ 10710360 (+)
washc5 kiaa0196 coding downstream 587331 11031992 ~ 11083098 (+)
nsmce2 LOC106606151 coding downstream 639700 11084361 ~ 11097464 (+)
LOC110512016 LOC106564714 coding downstream 758226 11202887 ~ 11211212 (+)
fbxo32 fbxo32 coding downstream 782836 11227497 ~ 11243074 (+)
G112620 NA non-coding upstream 878 10442312 ~ 10442937 (+)
G112619 NA non-coding upstream 4724 10438553 ~ 10439091 (+)
G112617 NA non-coding upstream 5943 10437408 ~ 10437872 (+)
G112616 NA non-coding upstream 8980 10434560 ~ 10434835 (+)
G112613 NA non-coding upstream 15270 10428292 ~ 10428545 (+)
G112625 NA non-coding downstream 5892 10450553 ~ 10450799 (+)
G112637 NA non-coding downstream 44908 10489569 ~ 10490000 (+)
G112639 NA non-coding downstream 54408 10499069 ~ 10499335 (+)
G112641 NA non-coding downstream 62560 10507221 ~ 10507456 (+)
G112642 NA non-coding downstream 65178 10509839 ~ 10510116 (+)
LOC118937659 NA other upstream 667364 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 719944 9701990 ~ 9742723 (+)
G111788 NA other upstream 999774 9440309 ~ 9444041 (+)
G111453 NA other upstream 1112199 9330269 ~ 9331616 (+)
LOC110535224 aif1 other upstream 1214790 9221418 ~ 9229025 (+)
G112697 NA other downstream 366857 10811518 ~ 10826063 (+)
elovl4a LOC106606161 other downstream 816893 11260912 ~ 11275480 (+)
G113285 NA other downstream 970270 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 1033315 11477976 ~ 11482741 (+)

Expression


Co-expression Network