G112637


Basic Information

Item Value
gene id G112637
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10489569 ~ 10490000 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU128599
agaggcaggtaaagcaagcactcactcacactccgtcgccgcgcgcttgtcctaggaaccttcttttcgttcccgttcctactcgtctggccgttcttcagtgggctcactctgccaagttagccggccatcctggcgttcggggtacgcttgcttccattcgccagcgtttttggtggcccacccgggagcatgacacgcgtcgcttcgtggctgcttgttcggtctgcgcgcagactaagtccggtaactcccctcctgccggccgtctcaggccgcttcccattccctctcgaccgtggtctcacatcgccttagattttgtcaccggactgccttcgtcagcggggaagactgttattcttacggttgtcgacaggttctctaaggcggctcattttattccccttgctaagcttccttctgctaaag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128599 True 432 lncRNA 0.46 1 10489569 10490000

Neighbor

gene id symbol gene type direction distance location
LOC110535244 ctnnb1 coding upstream 86924 10366101 ~ 10402645 (+)
LOC110507415 LOC106584755 coding upstream 192977 10293799 ~ 10296592 (+)
LOC110517641 LOC106584755 coding upstream 251190 10235740 ~ 10238379 (+)
LOC118937668 LOC106584755 coding upstream 269997 10217269 ~ 10219572 (+)
LOC110507434 LOC106584755 coding upstream 300454 10186105 ~ 10189115 (+)
LOC110507508 LOC106605488 coding downstream 136586 10626586 ~ 10710360 (+)
washc5 kiaa0196 coding downstream 541992 11031992 ~ 11083098 (+)
nsmce2 LOC106606151 coding downstream 594361 11084361 ~ 11097464 (+)
LOC110512016 LOC106564714 coding downstream 712887 11202887 ~ 11211212 (+)
fbxo32 fbxo32 coding downstream 737497 11227497 ~ 11243074 (+)
G112625 NA non-coding upstream 38770 10450553 ~ 10450799 (+)
G112622 NA non-coding upstream 44908 10443815 ~ 10444661 (+)
G112620 NA non-coding upstream 46632 10442312 ~ 10442937 (+)
G112619 NA non-coding upstream 50478 10438553 ~ 10439091 (+)
G112617 NA non-coding upstream 51697 10437408 ~ 10437872 (+)
G112639 NA non-coding downstream 9069 10499069 ~ 10499335 (+)
G112641 NA non-coding downstream 17221 10507221 ~ 10507456 (+)
G112642 NA non-coding downstream 19839 10509839 ~ 10510116 (+)
G112644 NA non-coding downstream 25492 10515492 ~ 10515990 (+)
G112646 NA non-coding downstream 31032 10521032 ~ 10522022 (+)
LOC118937659 NA other upstream 713118 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 765698 9701990 ~ 9742723 (+)
G111788 NA other upstream 1045528 9440309 ~ 9444041 (+)
G111453 NA other upstream 1157953 9330269 ~ 9331616 (+)
LOC110535224 aif1 other upstream 1260544 9221418 ~ 9229025 (+)
G112697 NA other downstream 321518 10811518 ~ 10826063 (+)
elovl4a LOC106606161 other downstream 771554 11260912 ~ 11275480 (+)
G113285 NA other downstream 924931 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 987976 11477976 ~ 11482741 (+)

Expression


Co-expression Network