G112648


Basic Information

Item Value
gene id G112648
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10524629 ~ 10525179 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU128611
ccacaaacacaacacacacacacacggcttaaAGCACCACAGGATCCCAATGCAATAAGCGGTCTGAGCCGAAGGTAAAGGGGTGGAGTTACTGGCAAGGAAACACACTCCAGTAACTGAAAACACAGGAGAGGAATCAACACAGGTTGTTTTGTACCTGTGTATGATTGTCTTTGTCAATGATGGAGAAACTGTTGGGTGTTGTATTACACACAGTGCTGCATTAACCCATCAAAGACGTGTTTGTCAGTCACTGTACCTTTCTGATAGAGTGGTTGGAGTCCTCACTTTACATTCAAGtcatttagtagatgctcttatccagagagacttacagtagtgagtcatttagtagatgctcttatccagagagacttacagtagtgagtcatttagtagatgctcttatccagagagacttacagtagtgagtcatttagtagatgctcttatccagagagacgtacagtagtgagtcatttagtagatgctcttatccagagtgcaaacattttcatactggtcccccataggaattaaacccacaaccc

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase RING2-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128611 True 551 lncRNA 0.48 1 10524629 10525179

Neighbor

gene id symbol gene type direction distance location
LOC110535244 ctnnb1 coding upstream 121984 10366101 ~ 10402645 (+)
LOC110507415 LOC106584755 coding upstream 228037 10293799 ~ 10296592 (+)
LOC110517641 LOC106584755 coding upstream 286250 10235740 ~ 10238379 (+)
LOC118937668 LOC106584755 coding upstream 305057 10217269 ~ 10219572 (+)
LOC110507434 LOC106584755 coding upstream 335514 10186105 ~ 10189115 (+)
LOC110507508 LOC106605488 coding downstream 101407 10626586 ~ 10710360 (+)
washc5 kiaa0196 coding downstream 506813 11031992 ~ 11083098 (+)
nsmce2 LOC106606151 coding downstream 559182 11084361 ~ 11097464 (+)
LOC110512016 LOC106564714 coding downstream 677708 11202887 ~ 11211212 (+)
fbxo32 fbxo32 coding downstream 702318 11227497 ~ 11243074 (+)
G112647 NA non-coding upstream 2032 10522098 ~ 10522597 (+)
G112646 NA non-coding upstream 2607 10521032 ~ 10522022 (+)
G112644 NA non-coding upstream 8639 10515492 ~ 10515990 (+)
G112642 NA non-coding upstream 14513 10509839 ~ 10510116 (+)
G112641 NA non-coding upstream 17173 10507221 ~ 10507456 (+)
G112649 NA non-coding downstream 3713 10528892 ~ 10529505 (+)
G112653 NA non-coding downstream 23910 10549089 ~ 10549344 (+)
G112655 NA non-coding downstream 27253 10552432 ~ 10552740 (+)
G112656 NA non-coding downstream 27702 10552881 ~ 10553745 (+)
G112657 NA non-coding downstream 32788 10557967 ~ 10558212 (+)
LOC118937659 NA other upstream 748178 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 800758 9701990 ~ 9742723 (+)
G111788 NA other upstream 1080588 9440309 ~ 9444041 (+)
G111453 NA other upstream 1193013 9330269 ~ 9331616 (+)
LOC110535224 aif1 other upstream 1295604 9221418 ~ 9229025 (+)
G112697 NA other downstream 286339 10811518 ~ 10826063 (+)
elovl4a LOC106606161 other downstream 736375 11260912 ~ 11275480 (+)
G113285 NA other downstream 889752 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 952797 11477976 ~ 11482741 (+)

Expression


Co-expression Network