G112666


Basic Information

Item Value
gene id G112666
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10579682 ~ 10579894 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU128632
gccttcttcacaacaattgaaccgctctccttgaagttcttgatgatccgataaatggttgatttaggtgcaatcttactgacagcaatatccttgcctgtgaagccctttttgtgcaaagcaatgatgacggcacgtgtttacTTTGctggtaaccatggttgacagaggaagaacaatgattccaagcaccaccctccttttgaagcttcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128632 True 213 lncRNA 0.44 1 10579682 10579894

Neighbor

gene id symbol gene type direction distance location
LOC110535244 ctnnb1 coding upstream 177037 10366101 ~ 10402645 (+)
LOC110507415 LOC106584755 coding upstream 283090 10293799 ~ 10296592 (+)
LOC110517641 LOC106584755 coding upstream 341303 10235740 ~ 10238379 (+)
LOC118937668 LOC106584755 coding upstream 360110 10217269 ~ 10219572 (+)
LOC110507434 LOC106584755 coding upstream 390567 10186105 ~ 10189115 (+)
LOC110507508 LOC106605488 coding downstream 46692 10626586 ~ 10710360 (+)
washc5 kiaa0196 coding downstream 452098 11031992 ~ 11083098 (+)
nsmce2 LOC106606151 coding downstream 504467 11084361 ~ 11097464 (+)
LOC110512016 LOC106564714 coding downstream 622993 11202887 ~ 11211212 (+)
fbxo32 fbxo32 coding downstream 647603 11227497 ~ 11243074 (+)
G112660 NA non-coding upstream 11251 10568134 ~ 10568431 (+)
G112657 NA non-coding upstream 21470 10557967 ~ 10558212 (+)
G112656 NA non-coding upstream 25937 10552881 ~ 10553745 (+)
G112655 NA non-coding upstream 26942 10552432 ~ 10552740 (+)
G112653 NA non-coding upstream 30338 10549089 ~ 10549344 (+)
G112667 NA non-coding downstream 163 10580057 ~ 10580273 (+)
G112676 NA non-coding downstream 13158 10593052 ~ 10593252 (+)
G112677 NA non-coding downstream 14425 10594319 ~ 10594612 (+)
G112687 NA non-coding downstream 28073 10607967 ~ 10608373 (+)
G112694 NA non-coding downstream 38297 10618191 ~ 10618534 (+)
LOC118937659 NA other upstream 803231 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 855811 9701990 ~ 9742723 (+)
G111788 NA other upstream 1135641 9440309 ~ 9444041 (+)
G111453 NA other upstream 1248066 9330269 ~ 9331616 (+)
LOC110535224 aif1 other upstream 1350657 9221418 ~ 9229025 (+)
G112697 NA other downstream 231624 10811518 ~ 10826063 (+)
elovl4a LOC106606161 other downstream 681660 11260912 ~ 11275480 (+)
G113285 NA other downstream 835037 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 898082 11477976 ~ 11482741 (+)

Expression


Co-expression Network