G112704



Basic Information


Item Value
gene id G112704
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10628891 ~ 10629120 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU128684
GGAGAGCTTGGTTGTGTTCCCCTGTTCAGACGTTGcgtgcatcaaccaatggttgcgtgtcACATCATCGACTGTGCCGTTTGgcaccagattgctataacatatgatgtggtaaACTGATGCCTATCCAGGCGTTGTTTGTATGCTGGTATCTGGTATGCTTCAGCAACACCTGGGCAGAGGAACTCTCCCCTcgtctctctctagctcctcatccctctatctttcac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU128684 True 230 lncRNA 0.59 1 10628891 10629120

Neighbor


gene id symbol gene type direction distance location
LOC110535244 ctnnb1 coding upstream 226246 10366101 ~ 10402645 (+)
LOC110507415 LOC106584755 coding upstream 332299 10293799 ~ 10296592 (+)
LOC110517641 LOC106584755 coding upstream 390512 10235740 ~ 10238379 (+)
LOC118937668 LOC106584755 coding upstream 409319 10217269 ~ 10219572 (+)
LOC110507434 LOC106584755 coding upstream 439776 10186105 ~ 10189115 (+)
washc5 kiaa0196 coding downstream 402872 11031992 ~ 11083098 (+)
nsmce2 LOC106606151 coding downstream 455241 11084361 ~ 11097464 (+)
LOC110512016 LOC106564714 coding downstream 573767 11202887 ~ 11211212 (+)
fbxo32 fbxo32 coding downstream 598377 11227497 ~ 11243074 (+)
elovl4a LOC106606161 coding downstream 631792 11260912 ~ 11275480 (+)
G112694 NA non-coding upstream 10357 10618191 ~ 10618534 (+)
G112687 NA non-coding upstream 20518 10607967 ~ 10608373 (+)
G112677 NA non-coding upstream 34279 10594319 ~ 10594612 (+)
G112676 NA non-coding upstream 35639 10593052 ~ 10593252 (+)
G112667 NA non-coding upstream 48618 10580057 ~ 10580273 (+)
G112719 NA non-coding downstream 18713 10647833 ~ 10648087 (+)
G112724 NA non-coding downstream 28378 10657498 ~ 10803291 (+)
G112736 NA non-coding downstream 94098 10723218 ~ 10729484 (+)
G112734 NA non-coding downstream 96755 10725875 ~ 10730168 (+)
G112699 LOC100196680 non-coding downstream 107489 10736609 ~ 10808249 (+)
LOC118937659 NA other upstream 852440 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 905020 9701990 ~ 9742723 (+)
G111788 NA other upstream 1184850 9440309 ~ 9444041 (+)
G111453 NA other upstream 1297275 9330269 ~ 9331616 (+)
LOC110535224 aif1 other upstream 1399866 9221418 ~ 9229025 (+)
G112697 NA other downstream 182398 10811518 ~ 10826063 (+)
G113285 NA other downstream 785811 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 848856 11477976 ~ 11482741 (+)

Expression



Co-expression Network