G112736


Basic Information

Item Value
gene id G112736
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10723218 ~ 10729484 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU128722
acagagagagggagtagtgaggggaaatggcttttataacacagagagggagggagtagtgaggggaaatggcttttataacacagagagggagtagtgaggggaaatggcttttataacacagagagggagggagtagtgaggggaaatggctttttataacacagagagggagggagtagtgaggggaaatggcttttataacacagagagggagtagtgaggggagatggcttttataacacagagagagagggagtagtgaggggaaatggcttttataacacagagagggagtagtgaggggaaatggcttttataacagagagagggagggagtagtgaggggaaatggcttttataacacagagagagtagtgaggggaaatggcttttataccacagtcagagagggagtagtgaggggaaatggcttttataacacagagagggagtagtgaggggaaatggcttttataacagagagagggagggagtagtgaggggaaatggcttttataacacagagagagtagtgaggggaaatggcttttataacacagagagggagtagtgaggggaaatggcttttataacacagagagagagagtagtgaggggaaatggcttttaacacagagggagtagtgaggggaaatggcttttataacacagagagagagtagtgaggggaaatggcttttataacacacagagagagagtagtgaggggaaatggcttttataacacagagagggagtagtgaggggaaatggcttttataacacagagagagtagtgaggggaaatggcttttataacacagagagggagtagtgaggggaaatggcttttataacagagagagggagggagtagtgaggggaaatggcttttataacacagagagagagtagtgaggggaaatggcttttataacacagagagagagagtagtgaggggaaatggcttttataacacagagagggagggagtagtgaggggaaattgctttttataacacagagagggagtagtgaggggaaatggcttttataacacagagagagggagtagtgaggggagatggcttttataacacagagagggagggagtagtgaggggaaatggcttttataacacagagagggagtagtgaggggagatggcttttataacacagagagggagggagtagtgaggggaaatggcttttataacacagagagggagtagtgaggggaaatggcttttataacacagagagagagtagtgaggggaaatggcttttataacacagagagggagggagtagtgaggggaaatggcttttataacacagagagggagtagtgaggggaaatggcttttataacacagagagggagtagtgaggggaaatggcttttataacacagtcagagagggagtagtgaggggaaatggcttttataacacagagagagagggagtagtgaggggagatggcttttataacacagagagagagggagtagtgaggggagatggcttttataacacagagagagagggagtagtgaggggagatggcttttacaacacagagagagagggagtagtgaggggaaatggcttttataacacagagagggagtagtgaggggagatggcttttataacacagagagagggagtagtgaggggagatGGCTTTTATAtcacagagagggagtagtgaggggaaatggcttttatatcacagagagag
>TU128723
tagtgaggggaaatggcttttataacagagagagggagggagtagtgaggggaaatggcttttataacagagagagggagggagtagtgaggggaaatggcttttataacacagagagagagtagtgaggggaaatggcttttataacacagagagagagagtagtgaggggaaatggcttttaacacagagagagtagtgaggggaaatggcttttataacacagagagggagtagtgaggggaaatggcttttataacacagagagagagagtagtgaggggaaatggcttttataacacagagagggagggatgaggggaaatggcttttataacacagagagggagggagtagtgaggggaaatggctttttataacacagagagggagtagtgaggggaaatggcttttataacacagagagagggagtagtgaggggaaatggcttttataacacagagagggagggagtagtgaggggaaatggcttttataacacagagagggagggagtagtgaggggaaatggcttttataacacagagagagggagtagtgaggggaaatggcttttatatcacagagagagggagtagtgaggggaaatggcttttataacacagagagggagtagtgaggggaaatggcttttataacacagagagggagtagtgaggggagatggcttttataacacagagagagggagtagtgaggggagatGGCTTTTATAtcacagagagggagtagtgaggggaaatggcttttatatcacagagagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128722 False 1754 lncRNA 0.46 5 10723218 10729484
TU128723 True 787 lncRNA 0.43 3 10725048 10729484

Neighbor

gene id symbol gene type direction distance location
LOC110507508 LOC106605488 coding upstream 12858 10626586 ~ 10710360 (+)
LOC110535244 ctnnb1 coding upstream 320573 10366101 ~ 10402645 (+)
LOC110507415 LOC106584755 coding upstream 426626 10293799 ~ 10296592 (+)
LOC110517641 LOC106584755 coding upstream 484839 10235740 ~ 10238379 (+)
LOC118937668 LOC106584755 coding upstream 503646 10217269 ~ 10219572 (+)
washc5 kiaa0196 coding downstream 302508 11031992 ~ 11083098 (+)
nsmce2 LOC106606151 coding downstream 354877 11084361 ~ 11097464 (+)
LOC110512016 LOC106564714 coding downstream 473403 11202887 ~ 11211212 (+)
fbxo32 fbxo32 coding downstream 498013 11227497 ~ 11243074 (+)
elovl4a LOC106606161 coding downstream 531428 11260912 ~ 11275480 (+)
G112719 NA non-coding upstream 75131 10647833 ~ 10648087 (+)
G112704 NA non-coding upstream 94098 10628891 ~ 10629120 (+)
G112694 NA non-coding upstream 104684 10618191 ~ 10618534 (+)
G112687 NA non-coding upstream 114845 10607967 ~ 10608373 (+)
G112677 NA non-coding upstream 128606 10594319 ~ 10594612 (+)
G112699 LOC100196680 non-coding downstream 7125 10736609 ~ 10808249 (+)
G112751 NA non-coding downstream 8292 10737776 ~ 10739040 (+)
G112770 NA non-coding downstream 45355 10774839 ~ 10775372 (+)
G112784 NA non-coding downstream 81003 10810487 ~ 10810791 (+)
G112697 NA non-coding downstream 82034 10811518 ~ 10826063 (+)
LOC118937659 NA other upstream 946767 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 999347 9701990 ~ 9742723 (+)
G111788 NA other upstream 1279177 9440309 ~ 9444041 (+)
G111453 NA other upstream 1391602 9330269 ~ 9331616 (+)
LOC110535224 aif1 other upstream 1494193 9221418 ~ 9229025 (+)
G113285 NA other downstream 685447 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 748492 11477976 ~ 11482741 (+)

Expression


Co-expression Network