G112814



Basic Information


Item Value
gene id G112814
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10866394 ~ 10872761 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU128828
tagatggggacagtagatggtgatctatatggggacagtagatggtgatctatatggggacagtagatggggacagtagatggtgatctatatggagacagtagatggtgatctatatggagacagtagatggtgatctatatggggacagtagatggtgatctatatggggacagtagatggtgatctatatgggaacagtagatggtgatctatatggggacagtagatggtgatctatatgggaacagtagatggtgatctatatggagacagtagatggtgatctatatggagacagtagatggtgatctatatggagacagtagatggtgatctatatgggaacagtagatggtgatctatatgggaacagtagatggtgatctatatggggacagtagatggtgatctatatggagacagtagatggtgatctatatggggacagtagatggtgatctatatggggacagtagatggtgatctatatggggacagtagatggtgatctatatggggacagtagatggtgatcta

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU128828 True 540 lncRNA 0.44 2 10866394 10872761

Neighbor


gene id symbol gene type direction distance location
LOC110507508 LOC106605488 coding upstream 156034 10626586 ~ 10710360 (+)
LOC110535244 ctnnb1 coding upstream 463749 10366101 ~ 10402645 (+)
LOC110507415 LOC106584755 coding upstream 569802 10293799 ~ 10296592 (+)
LOC110517641 LOC106584755 coding upstream 628015 10235740 ~ 10238379 (+)
LOC118937668 LOC106584755 coding upstream 646822 10217269 ~ 10219572 (+)
washc5 kiaa0196 coding downstream 159231 11031992 ~ 11083098 (+)
nsmce2 LOC106606151 coding downstream 211600 11084361 ~ 11097464 (+)
LOC110512016 LOC106564714 coding downstream 330126 11202887 ~ 11211212 (+)
fbxo32 fbxo32 coding downstream 354736 11227497 ~ 11243074 (+)
elovl4a LOC106606161 coding downstream 388151 11260912 ~ 11275480 (+)
G112797 NA non-coding upstream 18999 10846733 ~ 10847395 (+)
G112796 NA non-coding upstream 25161 10840199 ~ 10841233 (+)
G112794 NA non-coding upstream 26995 10837660 ~ 10839399 (+)
G112793 NA non-coding upstream 32608 10833585 ~ 10833786 (+)
G112791 NA non-coding upstream 35731 10830464 ~ 10830663 (+)
G112843 NA non-coding downstream 70358 10943119 ~ 10944198 (+)
G112847 NA non-coding downstream 124322 10997083 ~ 10999197 (+)
G112853 NA non-coding downstream 136412 11009173 ~ 11010311 (+)
G112859 NA non-coding downstream 150385 11023146 ~ 11023345 (+)
G113099 NA non-coding downstream 151822 11024583 ~ 11025872 (+)
G112697 NA other upstream 40331 10811518 ~ 10826063 (+)
LOC118937659 NA other upstream 1089943 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 1142523 9701990 ~ 9742723 (+)
G111788 NA other upstream 1422353 9440309 ~ 9444041 (+)
G111453 NA other upstream 1534778 9330269 ~ 9331616 (+)
G113285 NA other downstream 542170 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 605215 11477976 ~ 11482741 (+)
G113396 NA other downstream 835842 11708603 ~ 11709777 (+)

Expression



Co-expression Network