G112843


Basic Information

Item Value
gene id G112843
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 10943119 ~ 10944198 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU128863
ATatatctctaggacaaggtgacttttatcaatatatctctaggacaaggtgacttttatcaatatatctctaggacaaggtgacttttatcaatatatctctaggacaaggtgacttttatcaatatatctctaggacaaggtgacttttatcaatatatctctaggacaaggtgacttttatcaatagatctctaggacaaggtgacttttatcaatatatctctaggacaaggtgacttttatcaatatatctCTAGGACATTAGTCATAAGTGATGTTCCTTTGTTAGGGTTTGACTCCTCTTCATCATCTTAGTTTCCCTGGTAACAGTTGAGAGGTCGATGCATCTTAGTTTCCCTGGAAACAGTTGACAGGTCGATGCATCTTAGCCGCCCTGGTAACAGTTGACAGGTCGATGCATCTTAGTTTCCCTGGAAACAGTTGAGAGGTCGATGcatctttccataatatggacttggtctttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128863 True 488 lncRNA 0.38 2 10943119 10944198

Neighbor

gene id symbol gene type direction distance location
LOC110507508 LOC106605488 coding upstream 232759 10626586 ~ 10710360 (+)
LOC110535244 ctnnb1 coding upstream 540474 10366101 ~ 10402645 (+)
LOC110507415 LOC106584755 coding upstream 646527 10293799 ~ 10296592 (+)
LOC110517641 LOC106584755 coding upstream 704740 10235740 ~ 10238379 (+)
LOC118937668 LOC106584755 coding upstream 723547 10217269 ~ 10219572 (+)
washc5 kiaa0196 coding downstream 87794 11031992 ~ 11083098 (+)
nsmce2 LOC106606151 coding downstream 140163 11084361 ~ 11097464 (+)
LOC110512016 LOC106564714 coding downstream 258689 11202887 ~ 11211212 (+)
fbxo32 fbxo32 coding downstream 283299 11227497 ~ 11243074 (+)
elovl4a LOC106606161 coding downstream 316714 11260912 ~ 11275480 (+)
G112814 NA non-coding upstream 70358 10866394 ~ 10872761 (+)
G112815 NA non-coding upstream 70940 10867019 ~ 10872179 (+)
G112797 NA non-coding upstream 95724 10846733 ~ 10847395 (+)
G112796 NA non-coding upstream 101886 10840199 ~ 10841233 (+)
G112794 NA non-coding upstream 103720 10837660 ~ 10839399 (+)
G112847 NA non-coding downstream 52885 10997083 ~ 10999197 (+)
G112853 NA non-coding downstream 64975 11009173 ~ 11010311 (+)
G112859 NA non-coding downstream 78948 11023146 ~ 11023345 (+)
G113099 NA non-coding downstream 80385 11024583 ~ 11025872 (+)
G113103 NA non-coding downstream 86646 11030844 ~ 11031139 (+)
G112697 NA other upstream 117056 10811518 ~ 10826063 (+)
LOC118937659 NA other upstream 1166668 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 1219248 9701990 ~ 9742723 (+)
G111788 NA other upstream 1499078 9440309 ~ 9444041 (+)
G111453 NA other upstream 1611503 9330269 ~ 9331616 (+)
G113285 NA other downstream 470733 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 533778 11477976 ~ 11482741 (+)
G113396 NA other downstream 764405 11708603 ~ 11709777 (+)

Expression


Co-expression Network