G112853


Basic Information

Item Value
gene id G112853
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11009173 ~ 11010311 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU128878
gtacaaatctgttgttctgcccctgaacaggcagtcccatatggcaccctactcactatatagtgcactacattagaccagaaccctactccctatgtagtacactgcATTAGACCggaaccctactccctatatagtgcactactttagaccagaaacctactccctatatagtgcactacattagaccagaaccctactccctatatagtgcactactttagaccagaaacctactccctatgtagtgcactacattagaccagaaccctactccctatatagtgcactacattagaccagaaccctactccctatatagtgcactacattagaccagaactctactccctatgtagtgcactactttagaccattgaaatacagtctgaatgtgtctgttgaaatacagtctgaatgtgtctgttgaaatacagtctgaatgtgtctgttgaaatacagtctgaatgtgtctgttgaaatacagtctgaatgtgtctgttgaattacagtctgtgtctgtttagatacagtctgaatgtgtctgttgaattacagtctgaatgtgtctgttgaaatacagtctgaatgtgtctgttgaaatacagtctgaatgtgtctgttgaaatacagtctgaatgtgtctgttgaaatacagtctgtgtctgttgaaatacagtctgaatgtgtctgttgaattacagtctgaatgtgtctgttgaaatacagtctgaatgtgtctgttgaaatacagtctgaatgtgtctgttgaattacagtctgtgtctgtttagatacagtctgaatgtgtctgttgaattacagtctgaatgtgtctgttgaaatacagtctgaatgtgtctgttgaaatacagtctgaatgtgtctgttgaaatacagtctgaatgtgtctgttgaaatacagtctgaatgtgtctgttgaaatacagtctgaatgtgtctgttgaaatacagtctgtgtctgttgaaatacagtctgaatgtgtctgttgaaatacagtctgaatgtgtctgttgaattacagtctgtgtctgtttagatacagtctgaatgtgtctgttgaattacagtctgaatgtg

Function

NR:

description
PREDICTED: serine/arginine repetitive matrix protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128878 True 1102 lncRNA 0.39 2 11009173 11010311

Neighbor

gene id symbol gene type direction distance location
LOC110507508 LOC106605488 coding upstream 298813 10626586 ~ 10710360 (+)
LOC110535244 ctnnb1 coding upstream 606528 10366101 ~ 10402645 (+)
LOC110507415 LOC106584755 coding upstream 712581 10293799 ~ 10296592 (+)
LOC110517641 LOC106584755 coding upstream 770794 10235740 ~ 10238379 (+)
LOC118937668 LOC106584755 coding upstream 789601 10217269 ~ 10219572 (+)
washc5 kiaa0196 coding downstream 21681 11031992 ~ 11083098 (+)
nsmce2 LOC106606151 coding downstream 74050 11084361 ~ 11097464 (+)
LOC110512016 LOC106564714 coding downstream 192576 11202887 ~ 11211212 (+)
fbxo32 fbxo32 coding downstream 217186 11227497 ~ 11243074 (+)
elovl4a LOC106606161 coding downstream 250601 11260912 ~ 11275480 (+)
G112847 NA non-coding upstream 9976 10997083 ~ 10999197 (+)
G112843 NA non-coding upstream 64975 10943119 ~ 10944198 (+)
G112814 NA non-coding upstream 136412 10866394 ~ 10872761 (+)
G112815 NA non-coding upstream 136994 10867019 ~ 10872179 (+)
G112797 NA non-coding upstream 161778 10846733 ~ 10847395 (+)
G112859 NA non-coding downstream 12835 11023146 ~ 11023345 (+)
G113099 NA non-coding downstream 14272 11024583 ~ 11025872 (+)
G113103 NA non-coding downstream 20533 11030844 ~ 11031139 (+)
G113111 NA non-coding downstream 46921 11057232 ~ 11057874 (+)
G113119 NA non-coding downstream 66039 11076350 ~ 11079303 (+)
G112697 NA other upstream 183110 10811518 ~ 10826063 (+)
LOC118937659 NA other upstream 1232722 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 1285302 9701990 ~ 9742723 (+)
G111788 NA other upstream 1565132 9440309 ~ 9444041 (+)
G111453 NA other upstream 1677557 9330269 ~ 9331616 (+)
G113285 NA other downstream 404620 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 467665 11477976 ~ 11482741 (+)
G113396 NA other downstream 698292 11708603 ~ 11709777 (+)

Expression


Co-expression Network