G112859


Basic Information

Item Value
gene id G112859
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11023146 ~ 11023345 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU128886
CTTGAGTGTGTCCGTCACCGGGCCTAGAGAGAGGTCTGAAGTTGAGCCGGGCTGCGGCGACAAGTGTGGTAGACACTTTCACTGGTTGCCATGGGAGTTCCATCAGAACCGATTTTGGAGGGagattttttggggaaaaagtgGATTCCTGGTTTTTGGCCGACCCGTATGTTGTTTTAGGCTGTGTACGGACAAACTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU128886 True 200 lncRNA 0.50 1 11023146 11023345

Neighbor

gene id symbol gene type direction distance location
LOC110507508 LOC106605488 coding upstream 312786 10626586 ~ 10710360 (+)
LOC110535244 ctnnb1 coding upstream 620501 10366101 ~ 10402645 (+)
LOC110507415 LOC106584755 coding upstream 726554 10293799 ~ 10296592 (+)
LOC110517641 LOC106584755 coding upstream 784767 10235740 ~ 10238379 (+)
LOC118937668 LOC106584755 coding upstream 803574 10217269 ~ 10219572 (+)
washc5 kiaa0196 coding downstream 8647 11031992 ~ 11083098 (+)
nsmce2 LOC106606151 coding downstream 61016 11084361 ~ 11097464 (+)
LOC110512016 LOC106564714 coding downstream 179542 11202887 ~ 11211212 (+)
fbxo32 fbxo32 coding downstream 204152 11227497 ~ 11243074 (+)
elovl4a LOC106606161 coding downstream 237567 11260912 ~ 11275480 (+)
G112853 NA non-coding upstream 12835 11009173 ~ 11010311 (+)
G112847 NA non-coding upstream 23949 10997083 ~ 10999197 (+)
G112843 NA non-coding upstream 78948 10943119 ~ 10944198 (+)
G112814 NA non-coding upstream 150385 10866394 ~ 10872761 (+)
G112815 NA non-coding upstream 150967 10867019 ~ 10872179 (+)
G113099 NA non-coding downstream 1238 11024583 ~ 11025872 (+)
G113103 NA non-coding downstream 7499 11030844 ~ 11031139 (+)
G113111 NA non-coding downstream 33887 11057232 ~ 11057874 (+)
G113119 NA non-coding downstream 53005 11076350 ~ 11079303 (+)
G113120 NA non-coding downstream 54044 11077389 ~ 11077816 (+)
G112697 NA other upstream 197083 10811518 ~ 10826063 (+)
LOC118937659 NA other upstream 1246695 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 1299275 9701990 ~ 9742723 (+)
G111788 NA other upstream 1579105 9440309 ~ 9444041 (+)
G111453 NA other upstream 1691530 9330269 ~ 9331616 (+)
G113285 NA other downstream 391586 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 454631 11477976 ~ 11482741 (+)
G113396 NA other downstream 685258 11708603 ~ 11709777 (+)

Expression


Co-expression Network