G113138 (kiaa0196)


Basic Information

Item Value
gene id G113138
gene name kiaa0196
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11063603 ~ 11082755 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU129287
cctggttaaattaaaaggttaacctggttaaattaaaagGTTAACCTGGTTAACTGAAAAAGGTTAAATAGTTGTTAGGACTGCGGAAGTTCATTCCATAGCATCCTAACAGATAGGAGAGTAGTGTTGATAGGCTGGCAGGCTGGGTTTCACAACATAATATCACGTGACCTGCAGTTCCTTGACCATCATGAAGCAGAGCAGCCTGTCCAGCCCGTTGAGGCCGAAGGTCCCCAGGGTGTCCTGTATCTCAGAGAACAGACGGTTGTTGGTCACCTCCTGGTGGGTCTTCAGGTCGTACCAGGTGTTCAACTGGTCCATGTAACACGTCGCCTTGGGGTCTGTGATGCGGAGGATCTCTCTACAGAGTCGCCCGATGAAGGTGGCCGACTCATCGACCGCGGGGAACTTGGGTATGGGGATATGGGTCGACTGGTAGACACTCTGCCAATCCTGGATCTTGGTGCGTAGGAAGCTGTTGCACTCCTGCTCCACGTTGTAGTTGATGATACGAGAGACCTCCTCCTGCCAGATCTTCAGGCCGTAGATGGAAACGTAATCCTGGATGTACTCAAAGGCCCGGTAGAATCCGTCCATGGTGGCCGCCATCTCCTTCAGCTTCGGCATCAACTCACTGGTCTGTACCAGGTGATGAGAAATGACATTTACCAGGATTTAATATTCTGTAATACT
>TU129290
cccactgtgtatcATCCTATCATAATAATAAGCATGTACGAGCCTTCATAACGTCTTATAACGAGACTTATAAATATGTCATGTCTCTCCATGCATCCTCTCAGATGGGGCCACTGACTTGTTGAGGTTTTCCAGAGCAGCAGCGAGGTGTTTGGAGTCAAACTTGCAGGAGTAGTTCAACTCGTTGGCGATCTGTTGCCTCAGGATCTGCATCTGACCAACCTTCATGATGGACTCCAGGTACGGACCCCAGATCCTCTGTGTTTTGGCGACAGCGTTGGCATAACCTTTACTGGCATTCGCCACAATACCTTTGACGGGATTGACAGCGCTCAGCATGGCTTTAAAGACATCCACCATAGCCTTGTCTCTCAGGATGGTCTTCTGAAACACCGACAGGAAGTTCTGCAGTTCCTTGACCATCATGAAGCAGAGCAGCCTGTCCAGCCCGTTGAGGCCGAAGGTCCCCAGGGTGTCCTGTATCTCAGAGAACAGACGGTTGTTGGTCACCTCCTGGTGGGTCTTCAGGTCGTACCAGGTGTTCAACTGGTCCATGTAACACGTCGCCCTGGGAAACACAGGTAACAGGTGAAGACTTTGCATGAAGACATATTAAAAGCACTGAGAAGAGAG
>TU129289
TTATATTTATTCAAAGCCTCTTTTGTATTTAATTAATGACATATTACCACAGTGACATTATACCAAAGCTGGTAACACCTGATGTTATTAAAAACCATTCAACTATTTACCGTGTTACTAAAGCATTAGCACATTAATGGTCATTACGTAACCAAGAGATTAATTAAAGTCAAAATGAATGAATCAACAGAAAGTTAAACCAAGAGGCCTTTATCCAGATCTTCACAGGACTGTCCTGAACTCGGACTGTCCTGACTGTCCTGAACATCTTTGAAAACAGAacattgagcacacacacacatgcaatctccatagacaaacattgcccAGTGACTCAacgtggcatcgtcataggatgccacccttCTAACAAGtccggtgtccacatacttttggtcatgtagtgtaccttgTTGAGTGGGTTGTGTAtccctgtagtagtagtagtagtagtagcagtaatagtaatTAGAAGCCAGACCTTGTTGAGTGGGTTGTGaatgtagtagttgtagtagtagtagtagtagtaattaaAGCCAGACCTTGTTGAGTGGGTTGTGAATGCCTGCTGCCTCCAGAGAGGCTGTGATCTCATACAGCAGGTTGTTGTCCTCCTTGGGGTATGGAAGGCTGGGGTCCTGGTAGTGGGCTTCTATATCCGCCAGTAGAGacctacagtagatacagcagACACCTGACTGTTCAACACACCCTTTAAAATGACAGACACAAATTATTTTAGTGACATTACTTTACCGGGTTCACACTCTTAGGCCGAGTTTACACACGCAGacaaattctgatcttttgcccaattacAGGTAAAAGAGCTGAtccgattggtcaaaagaccaattAGTGGTAAAAGAGCTGATccgattggtcaaaataccaattagtggtaAAAGAGCTGAtccgattggtcaaaagaccaattagtagaAACAT

Function

NR:

description
PREDICTED: WASH complex subunit strumpellin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129287 False 693 lncRNA 0.37 5 11063603 11066986
TU129290 False 633 lncRNA 0.35 4 11066565 11072475
TU129289 True 951 lncRNA 0.39 4 11072829 11082755

Neighbor

gene id symbol gene type direction distance location
LOC118937688 NA coding downstream 4130 11058263 ~ 11060049 (-)
LOC110511734 LOC105023503 coding downstream 62481 10840566 ~ 11001122 (-)
LOC118937685 NA coding downstream 182213 10879856 ~ 10881390 (-)
LOC110512108 rad21 coding downstream 237591 10811513 ~ 10826012 (-)
LOC118937678 NA coding downstream 301365 10759359 ~ 10762238 (-)
lratd2b LOC106573048 coding upstream 82358 11165113 ~ 11168638 (-)
prelid3a LOC106593866 coding upstream 165282 11196145 ~ 11261793 (-)
LOC110514530 LOC106572903 coding upstream 315337 11398092 ~ 11402862 (-)
LOC110513475 LOC106592216 coding upstream 389184 11471939 ~ 12290710 (-)
LOC118937712 NA coding upstream 501453 11584208 ~ 11585455 (-)
G113153 NA non-coding downstream 144 11062108 ~ 11063459 (-)
G113143 kiaa0196 non-coding downstream 1565 11057134 ~ 11062038 (-)
G113146 NA non-coding downstream 8020 11054602 ~ 11055583 (-)
G113104 NA non-coding downstream 32282 11031119 ~ 11031321 (-)
G113158 NA non-coding upstream 14209 11096964 ~ 11097169 (-)
G113167 NA non-coding upstream 23827 11106582 ~ 11106982 (-)
G113171 NA non-coding upstream 28767 11111522 ~ 11111843 (-)
G113172 NA non-coding upstream 29104 11111859 ~ 11112168 (-)
G113173 NA non-coding upstream 30077 11112832 ~ 11113072 (-)
G113096 NA other downstream 41869 11021041 ~ 11021734 (-)
eif3h LOC100196680 other downstream 255359 10736729 ~ 10808244 (-)
G112965 NA other downstream 344945 10648265 ~ 10718658 (-)
G112928 NA other downstream 492795 10570442 ~ 10570808 (-)
G112567 NA other downstream 716668 10346471 ~ 10346935 (-)
G113688 NA other upstream 127718 11210473 ~ 11218154 (-)
G113712 NA other upstream 228088 11310843 ~ 11312658 (-)
G113720 NA other upstream 240286 11323041 ~ 11325612 (-)
G113733 LOC106606124 other upstream 266587 11349342 ~ 11352741 (-)

Expression


Co-expression Network