G113172



Basic Information


Item Value
gene id G113172
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11111859 ~ 11112168 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU129328
GAGGTGACCTCTCTTATTGTTTCCGTGCTATGAGGTGACCTCTCGTCTTGTTTCCCTGCTATGAGGTGACCTCTCGTCTTGTTTCTCTGCTATGAGGTGACCTCTCTTCTTGTTTCCCTGCTCTGAGGTGACCTCTCTTATTGTTTCCCTGCTATGAGGTGACCTCTCTTATCGTTTCCCTGCTATGAGGTGACCTCTCTGCTTGTTTCCCTGCTCTGAGGTGATCTCTCTTATCGTTTCCCTGCTGTGAGGTGACCTCCCTTCATATTGTTTCCCTGCTCTGAGGTGACCTCTCTTATTGTTTCCCTGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU129328 True 310 lncRNA 0.49 1 11111859 11112168

Neighbor


gene id symbol gene type direction distance location
LOC118937688 NA coding downstream 52386 11058263 ~ 11060049 (-)
LOC110511734 LOC105023503 coding downstream 110737 10840566 ~ 11001122 (-)
LOC118937685 NA coding downstream 230469 10879856 ~ 10881390 (-)
LOC110512108 rad21 coding downstream 285847 10811513 ~ 10826012 (-)
LOC118937678 NA coding downstream 349621 10759359 ~ 10762238 (-)
lratd2b LOC106573048 coding upstream 52945 11165113 ~ 11168638 (-)
prelid3a LOC106593866 coding upstream 135869 11196145 ~ 11261793 (-)
LOC110514530 LOC106572903 coding upstream 285924 11398092 ~ 11402862 (-)
LOC110513475 LOC106592216 coding upstream 359771 11471939 ~ 12290710 (-)
LOC118937712 NA coding upstream 472040 11584208 ~ 11585455 (-)
G113171 NA non-coding downstream 16 11111522 ~ 11111843 (-)
G113167 NA non-coding downstream 4877 11106582 ~ 11106982 (-)
G113158 NA non-coding downstream 14690 11096964 ~ 11097169 (-)
G113138 kiaa0196 non-coding downstream 29104 11063603 ~ 11082755 (-)
G113153 NA non-coding downstream 48400 11062108 ~ 11063459 (-)
G113173 NA non-coding upstream 664 11112832 ~ 11113072 (-)
G113175 NA non-coding upstream 2453 11114621 ~ 11114924 (-)
G113181 NA non-coding upstream 12790 11124958 ~ 11125226 (-)
G113182 NA non-coding upstream 13581 11125749 ~ 11126321 (-)
G113659 NA non-coding upstream 17949 11130117 ~ 11130526 (-)
G113096 NA other downstream 90125 11021041 ~ 11021734 (-)
eif3h LOC100196680 other downstream 303615 10736729 ~ 10808244 (-)
G112965 NA other downstream 393201 10648265 ~ 10718658 (-)
G112928 NA other downstream 541051 10570442 ~ 10570808 (-)
G112567 NA other downstream 764924 10346471 ~ 10346935 (-)
G113688 NA other upstream 98305 11210473 ~ 11218154 (-)
G113712 NA other upstream 198675 11310843 ~ 11312658 (-)
G113720 NA other upstream 210873 11323041 ~ 11325612 (-)
G113733 LOC106606124 other upstream 237174 11349342 ~ 11352741 (-)

Expression



Co-expression Network