G113666


Basic Information

Item Value
gene id G113666
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11147950 ~ 11149850 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU130031
AGGTCAATATAATACAGTCTGGAGGTCAATATAATACAGTCTGGAGGTCAATATAATACAGTCTGGAGGTCAATATAATACAGTCTGTTGGAGGTCAATATAATACAGTCTGTTGGAGGTCAATATAATACAGTCTGGAGGTCAATATAATACAGTCTGTTGGAGGTCAATATAATACAGTCTGGAGGTCAATATAATACAGTCTGTTGGAGGTCAATATAATACAGTCTGGAGGTCAATATAATACAGTCTGGAGGTCAATATAATAcgttaccatagggccctggtctatagtagtgtactatataaagcccagtgttatcatagggccctggtctatagtagtgtactatataaagtgttaccatagggccctggtctatagtagtgtactatataaagcccagtgttatcatagggccctggtctatagtagtgtactatataaagtgttaccatagggccctggtctatagtagtgtactatataaagcccagtgttaccatagggccctggtctatagtagtgtactatataaagtgttaccatagggccctggtctatagtagtgtactatataaagtgttaccatagggccctggtctatagtagtgtactatataaagtgttaccatagggccctggtctatagtagtgtactatataaagtgttaccacagggccctggtctatagtagtgtactatataaagtgttaccatagggccctggtctatagtagtgtactatataaagcccagtgttaccatagggccctggtctatagtagtgtactatataaagcccagtgttaccatagggccctggtctatagtagtgtactatataaagtgtttaccacagggccctggtctatagtagtgtactatataaagtgttaccatagggccctggtctatagtagtgtactatataaagcccagtgttaccatagggccctggtctatagtagtgtactatataaagcccagtgttatcatagggccctggtctatagtagtgtactatataaagcccagtgttatcatagggccctggtctatagtagtgtactatataaagtgtttaccatagggccctggtctatagtagtgtactatataaagcccagtgttaccatagggccctggtctatagtagtgtactatataaagtgtttaccacagggccctggtctatagtagtgtactatataaagcccagtgttaccatagggccctggtctatagtagtgtactatataaagcccagtgttaccac
>TU130032
AGGTCAATATAATACAGTCTGGAGGTCAATATAATACAGTCTGGAGGTCAATATAATACAGTCTGGAGGTCAATATAATACAGTCTGTTGGAGGTCAATATAATACAGTCTGTTGGAGGTCAATATAATACAGTCTGGAGGTCAATATAATACAGTCTGTTGGAGGTCAATATAATACAGTCTGGAGGTCAATATAATACAGTCTGTTGGAGGTCAATATGATACAGTCTGTTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130031 False 1281 lncRNA 0.39 4 11147950 11149850
TU130032 True 235 lncRNA 0.37 3 11149447 11149850

Neighbor

gene id symbol gene type direction distance location
LOC118937688 NA coding downstream 88477 11058263 ~ 11060049 (-)
LOC110511734 LOC105023503 coding downstream 146828 10840566 ~ 11001122 (-)
LOC118937685 NA coding downstream 266560 10879856 ~ 10881390 (-)
LOC110512108 rad21 coding downstream 321938 10811513 ~ 10826012 (-)
LOC118937678 NA coding downstream 385712 10759359 ~ 10762238 (-)
lratd2b LOC106573048 coding upstream 15263 11165113 ~ 11168638 (-)
prelid3a LOC106593866 coding upstream 98187 11196145 ~ 11261793 (-)
LOC110514530 LOC106572903 coding upstream 248242 11398092 ~ 11402862 (-)
LOC110513475 LOC106592216 coding upstream 322089 11471939 ~ 12290710 (-)
LOC118937712 NA coding upstream 434358 11584208 ~ 11585455 (-)
G113662 NA non-coding downstream 10260 11136533 ~ 11137690 (-)
G113661 NA non-coding downstream 13988 11133651 ~ 11133962 (-)
G113660 NA non-coding downstream 15020 11132079 ~ 11132930 (-)
G113659 NA non-coding downstream 17424 11130117 ~ 11130526 (-)
G113182 NA non-coding downstream 21629 11125749 ~ 11126321 (-)
G113669 NA non-coding upstream 7667 11157517 ~ 11157750 (-)
G113671 NA non-coding upstream 19097 11168947 ~ 11169149 (-)
G113672 NA non-coding upstream 20291 11170141 ~ 11170720 (-)
G113673 NA non-coding upstream 22302 11172152 ~ 11172356 (-)
G113675 NA non-coding upstream 25037 11174887 ~ 11178729 (-)
G113096 NA other downstream 126216 11021041 ~ 11021734 (-)
eif3h LOC100196680 other downstream 339706 10736729 ~ 10808244 (-)
G112965 NA other downstream 429292 10648265 ~ 10718658 (-)
G112928 NA other downstream 577142 10570442 ~ 10570808 (-)
G112567 NA other downstream 801015 10346471 ~ 10346935 (-)
G113688 NA other upstream 60623 11210473 ~ 11218154 (-)
G113712 NA other upstream 160993 11310843 ~ 11312658 (-)
G113720 NA other upstream 173191 11323041 ~ 11325612 (-)
G113733 LOC106606124 other upstream 199492 11349342 ~ 11352741 (-)

Expression


Co-expression Network