G113205


Basic Information

Item Value
gene id G113205
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11165187 ~ 11166859 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU129380
agtttttaaaaAACCCATAAAATCAATAATAGACTCAATTAAAGTGCAGCCAGgaaacatcccaaatggcaccctgtatagtaagtagtgcactacatttgacaagGGACCATAGgcctctggccaaaagtagtgcactatatagggagccatttgggacacacagaaTTGTGGTTGTGAATACAATAACCGGTCAGACAGGTCAGAAAGGGAATCATAAAGTCACAGTAGGGAATCCGGAAAGTGAAATGTCAAATGGGTCACATGTTctgcttcctccctctccattgGTCTAAAACACCAGGGGTTGTACAGGAGCATGTTCTGCTCCCTCTCCATTGGTCTAAAACACCAGGGTTGTACAGGAACatgttctgctctctctccattgGTCTAAAACACCAGGGGTTGTCCAGGAGCATGTTCTGCTCCCTCTCCATTGGTCTAAAACACCAGGGGTTGTCCAGGAGCACGTAGTGAAACAGACAGATATGAAAGGCTATAGGAAAGGCTTTGCTCCTCTTCAGATGGGTAGAAAACAACAGAGACCAGTCCATATGGGACGACTTgaagctacactgaacaaaaatattaaaaaagCAACGTGTAAAAGTGTGTTTTTTTCCCATGATTCATGAGCTGGAATAAAAAGAGacaagaaatgttccatacacacattTTCTGGCACAAATTTGTTGACATCCCTGTTAGGGAACATTTCTCTCCTGTGCcaagataatccgttcacctgacaggtgtggcatatcaagaagctgattaaacagaatgataattacacaggtgcaccttgtgctggggggacaataaaaaggccacacacacaaaaaaaaagtgcagttttgtcacacaacacaatgtcacatatgtctcaagttgagggagcgtacacttgtcatgctgactgcaggaaggtccaccagagctgttatcAGAGAATTTAATTTTGATTTCTCTAACATAACCCACATCTAACGTTGTTTTTAGAGAATTTCGCAGTATATGTCCAACCAACCTCAAAacccgcagaccacgtgtacggcgtcgtgtgggcgagcggtttactGACGTCAACGTtgtgtgaacagagtgccccgtggtggcggtggggttatggtatgggccaggtataagctacggacacAACGAACACAATGGCATTTTAAATCGAGGGCAATTTGGAATGtccagagataccgtgacgagatcctgaggctcatttaaaaattaaaaataatgtatctgtgaccaacagatgcatatttgtTTACATCCGATAGTGAACATTAGACCCTAAATCCATATACTAGGGCCTAATCAATTTATTTCAAgcgactgatttcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129380 True 1362 lncRNA 0.47 3 11165187 11166859

Neighbor

gene id symbol gene type direction distance location
nsmce2 LOC106606151 coding upstream 67723 11084361 ~ 11097464 (+)
washc5 kiaa0196 coding upstream 82089 11031992 ~ 11083098 (+)
LOC110507508 LOC106605488 coding upstream 454827 10626586 ~ 10710360 (+)
LOC110535244 ctnnb1 coding upstream 762542 10366101 ~ 10402645 (+)
LOC110507415 LOC106584755 coding upstream 868595 10293799 ~ 10296592 (+)
LOC110512016 LOC106564714 coding downstream 36028 11202887 ~ 11211212 (+)
fbxo32 fbxo32 coding downstream 60638 11227497 ~ 11243074 (+)
elovl4a LOC106606161 coding downstream 94053 11260912 ~ 11275480 (+)
LOC118944054 NA coding downstream 107822 11274681 ~ 11277557 (+)
LOC110520740 LOC106592347 coding downstream 140315 11307174 ~ 11324807 (+)
G113204 NA non-coding upstream 4235 11158696 ~ 11160952 (+)
G113202 NA non-coding upstream 7520 11157443 ~ 11157667 (+)
G113192 NA non-coding upstream 27888 11135026 ~ 11137299 (+)
G113191 NA non-coding upstream 30295 11134506 ~ 11134892 (+)
G113190 NA non-coding upstream 32335 11132187 ~ 11132852 (+)
G113207 NA non-coding downstream 4046 11170905 ~ 11171113 (+)
G113208 NA non-coding downstream 4519 11171378 ~ 11171641 (+)
G113209 NA non-coding downstream 5182 11172041 ~ 11172349 (+)
G113210 NA non-coding downstream 5718 11172577 ~ 11172807 (+)
G113233 NA non-coding downstream 63707 11230566 ~ 11231000 (+)
G112697 NA other upstream 339124 10811518 ~ 10826063 (+)
LOC118937659 NA other upstream 1388736 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 1441316 9701990 ~ 9742723 (+)
G111788 NA other upstream 1721146 9440309 ~ 9444041 (+)
G111453 NA other upstream 1833571 9330269 ~ 9331616 (+)
G113285 NA other downstream 248072 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 311117 11477976 ~ 11482741 (+)
G113396 NA other downstream 541744 11708603 ~ 11709777 (+)

Expression


Co-expression Network