G113209


Basic Information

Item Value
gene id G113209
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11172041 ~ 11172349 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU129388
CATGTCCCCTAACCCATGTTCCCTAACCCTAAAAAATGTGTCCTAACCCATgtgtcctaaccttaacctttctctctccctctgctctctctgctctctgctctctgatctctctccttctgatctctctgctctctgtctctgatctctctgctctctgctctttctccctctgatctctctgctctctgtctctctgctctctgtctctgatctctctgctctctgctctttctccctctgatctctctgctctctgtctctctgctctctgtctctgatctctctgctctctgctctctctccttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129388 True 309 lncRNA 0.39 1 11172041 11172349

Neighbor

gene id symbol gene type direction distance location
nsmce2 LOC106606151 coding upstream 74577 11084361 ~ 11097464 (+)
washc5 kiaa0196 coding upstream 88943 11031992 ~ 11083098 (+)
LOC110507508 LOC106605488 coding upstream 461681 10626586 ~ 10710360 (+)
LOC110535244 ctnnb1 coding upstream 769396 10366101 ~ 10402645 (+)
LOC110507415 LOC106584755 coding upstream 875449 10293799 ~ 10296592 (+)
LOC110512016 LOC106564714 coding downstream 30538 11202887 ~ 11211212 (+)
fbxo32 fbxo32 coding downstream 55148 11227497 ~ 11243074 (+)
elovl4a LOC106606161 coding downstream 88563 11260912 ~ 11275480 (+)
LOC118944054 NA coding downstream 102332 11274681 ~ 11277557 (+)
LOC110520740 LOC106592347 coding downstream 134825 11307174 ~ 11324807 (+)
G113208 NA non-coding upstream 400 11171378 ~ 11171641 (+)
G113207 NA non-coding upstream 928 11170905 ~ 11171113 (+)
G113205 NA non-coding upstream 5182 11165187 ~ 11166859 (+)
G113204 NA non-coding upstream 11089 11158696 ~ 11160952 (+)
G113202 NA non-coding upstream 14374 11157443 ~ 11157667 (+)
G113210 NA non-coding downstream 228 11172577 ~ 11172807 (+)
G113233 NA non-coding downstream 58217 11230566 ~ 11231000 (+)
G113234 NA non-coding downstream 58825 11231174 ~ 11231475 (+)
G113236 NA non-coding downstream 61513 11233862 ~ 11234335 (+)
G112697 NA other upstream 345978 10811518 ~ 10826063 (+)
LOC118937659 NA other upstream 1395590 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 1448170 9701990 ~ 9742723 (+)
G111788 NA other upstream 1728000 9440309 ~ 9444041 (+)
G111453 NA other upstream 1840425 9330269 ~ 9331616 (+)
G113285 NA other downstream 242582 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 305627 11477976 ~ 11482741 (+)
G113396 NA other downstream 536254 11708603 ~ 11709777 (+)

Expression


Co-expression Network