XLOC_020910 (nlrc7)


Basic Information

Item Value
gene id XLOC_020910
gene name nlrc7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 9946793 ~ 9974022 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041153
TGATGGTCGTCTGATTGTCTTCAGCAACACAAAGACACCAGTGTTGAGCTGTTGATCTGCAGTATGTCAGAGGAGCAGGGAAAGATGagtctctcagagaaacacagTGTAATATCAGACTCATGTGTGTCCGGCTCTGTGTCTGTGAAGAGCGACTGCTCAAAAGATGGTGATCTCCCGAACTTCAGTGTGGAAAAGCCAATGTCTGCTAAAAGTGTAATATCAGACTCATGTGTGTCCGGCTCTGTGTCTGTGAAGAGCGACTGCTCAAAAGATGGTGATCTCCCGAACTTCAGTGTGGAAAAACAAACGTCTGCTAAAAGTGTAATATCAGACTCCTGTGTGTCCGGCTCTGTGTTTGTGAAGAGTGACTGCTCAAAAGATGGTGATCTCCCGAACTTCAGCGAGGAAACACCGTCATCTGGCAAAAGttttgaaCATAAGACATCAGACTCAGACTTCCAGACTCACAGGAAACACAAGGGGTTTCAAGACGGTCTTCTGGGGATCTTTCAGGATCTTGAAAACCAGATAATGAATTATCTGAAGCATGAGCTAGAAAAGTTTAAGAAAATCttacaaaaagaaaacataattGACTTTGTAAAGGACTTTAACGAGAACAGATGCAGCATCAAAGAAGCAGCTCTCGATCTCACACTCTACTTCCTGAGGGAAATGAAGCAAGAGGAAAGTGCTGATACTCTAGAAGACGAACTGATCTTCATTCATCAGCTGAAATGTGGCCTACAGAAGAAGTATCagtgtgtgtttgaaggaattgcacAGCAAGGAGATTCAAGACTTCTGAAgaacatctacacagatctctatatcactcagggtggCAGTGAACAGGTCAATACTGAACATGAGGTCAGACAGATTGAAGTTGCTTCTAGACGTCATGAAGCACAAGAGCTACAGGTTGAATGCAGACACTTGTTTGAAGCGTCTGAACAAGATAAGCAGATCAGAACTGTACTGACAAAAGGAGtcgctggcatcgggaaatcagtctctgtgcaaaagtttgttctggattgggctgaaggaaaagaaaatcaagagatcagcttcatatttcctcttccattcagagagatgaacttaaaggagaaagaaacaCTCAGTTTGATGGAGcttataactcagtttttcccggAGAcaaaaggactgaaccttacaagaaggaatcgattcaaagtcctgttcatccttgatggattggatgaatgtcgtcttcctctgaactttgctggtaatgagacgtgttgTGATGTTTCGTCGCCAgcctctctggatgttctcctgacgaacctcatcaagggaaatctgcttccttctgctctcatctggatcaccagcagaccagcagctgccagtaagattcctcctgactgtatcgaccggctgacagagatacgaggattcaatgatgcacaaaaagaggagtacttcagaaaaaGACTGACAGATGAGAATCAGGCCAAAGAAATCATTGATCATGTTAAACAATCAAAGAGTCTCTtcatcatgtgccacatcccagtcttctgctggatttcagccactgttctccaaaACATTTTACAGGAGAAGAGAAATAATGATGTTAAACACAATCAAGCTGATGACGCctccaaaacactgcaggaatCAAACACTGAAGAcactcccaagactctgacacagatgtacacacactttctgcgctttcagatccagcagagcagacgAAAGTATAATGGAGAATACACACCAGATGTGTCCTGGGATAAAGACgccatcctttcactggggaaactggcatTTCATCATCTGTTAAACAACAACCTAATCTTCTATGACACAGACCTGGAAGCCTGTGGTATTGACGTCTATAAGGCCTCAGtttactcaggcatgtgtacccagatctttaaggaggaaaCTGGgatcattcttggtaccatgtactgctttgtTCACCTGACTCTTCAAGAGTTTATCGCAGCCCTTTATGCACATCTGATTCTAGACACTAACAAGAAAAGTGTGTTTGATCAAgactctaaaaaaataaatgagtccatgattgatttgctgaagactgcagtggacaaggcACTAGAGAGTGACAATGGGCACCTGGACCTTTTtcttcgcttccttctcggtctgtcacttCAGTCCAATCGACGAATCTTACGAGGTCTGTTGACACCGCAAGACCAAGATGACCAAAGCACAGAGAAAATACTTCAGTATATCAAGCAGAAGTTTGATGCGAATCtttctccagagagatccatcaatctgttctactgtctgaatgaactgaacgaaCAAACTCTGGTGAAAGAGATTCAGACTCACCTTAGCAAAGGAAGTCTCTCATCTGCTGACTTTTCATCTGCCCACTGGTCTGCTTTGgcctttgtgttgttgacatcaGATGAGGAgatggaggagtttgagcttcagaaattccataaatcagacgagtgtctcatcagactatcagcagtcatcaaaacctgcaaaagagctctGTTAAATGATTGTAACTTAACAGACAGAAGCTGTTCAGCTTTGGCTACAGTTCTTGAGTCAGATACCAGTCTAAAAGAGCTGAACATGAGTAAtaataatctgcaggattcaggagtgaagctgctctgTACTGGACTGAAGGATATGAAGTGTGAATTGGAGATACTGAGACTTTCAGACTGCAATATTACAGAGGAAGGTTATAAAGCactggcttcagctctgagatcaaatcCTTCACATCTACTAGAGCTAGACCTCAGAGGAAATGATCCTGGAGAATCAGGAGTAAAGGAGCTTGATGATTTACTGCAGGATCCAAACTGTACACTGAAAACACTGAGGTTTTTAAGTCCTTCTGCAGAAGAATCCTGTCAGTTTGTGAATGGGGTTGTGGGTAAAAACCCATTACTCCTAAAAACACTGAATCTGAATGATTTCCGATCCACGCGTAACCATCCATTTATATATGAAATAGAAGACACACAAGTGAATCACCTCGCTGCTCTACTGCAGGATAAACACTGTAGAGTCAACATGCTTATTCTGGGTGGATGCAGTTTTACAGATGATCAGTGGGAGAGCCTAACTTCAGCTCTGAAATTAAACCCATCACACCTGAGAGAACTGATCCTGATGTGGAATGGACCGGGAGAGTCTGGAGTGAAAATCCTCAGTGATTTCCTAATCGAGCCACAATTAAAGCTGGAGAAACTATGTTTGTGTTATTGCAGTATTACAGAGGAACGGTGTGAGATCCtgacttcagctctgaaatcaaACCCATCACACCTGAGAGAACTGAACCTCAGTCAGAATATACCTGGCGACTCTGGAATGAAAAACCTCAGTGATTTACTGATGAATCCACAATCCAAGCTGGAGAAACTACAACTTTGTAAATGCAGTATTACAGAGGAACAGTGTGTGATCCtgacttcagctctgaaatcaaACCCATCACACCTGAGAGATCTGAACCTCAGTCTGAATAATCTAGGAGACTCTGGAGTGAAAACTCTAAGTGATTTACTGATGAAGCCACACTTAAAGATGGAAAAACTATGGCTGTGTAAATGCAGTATTACAGAGGAACAGTGTGTGATCCTGGCTTCAGCTCTGAAATCAAACCCATCACACCTGAGAGAACTGAGCCTCAGTGAGAATAATCTGGGAGACTCTGGAGTGAAAAACCTCAGTGATTTACTGATGAAGCCACAGTTCAAGCTGGAGAAACTACATCTGTCTCATTGCAGTATCACAGAGGAACAGTGCGAGATCCtgacttcagctctgaaatcaaACCCATCACACCTGAGAGAACTGGACATAAGTAAGAATCAAATTAGAAACACTGGAGTGAATCTCTTATGTGACGTACTGAACAATTCAGACTgcaaactggagacactgagACTAAACGACTGTGGCATCACAGATGTTTCTTCTTTAACTCAGTGTTTGACGAACACAAAAGCTCTGCAGTTTCTAAAAGTGCTTTATCTGAGGGAAAATCACATTGGAGACTCAAAGCAGGAGCTCAGTGATGTGGTACGAGACTCAAACTGTGAACTGAGTGTTGATGAATTTTCACTGCCAGACTTTGGTCAAATCAAAGACATTAAATGCTGTATATCATAGTTTTTGTGAAGAAGAGATGCATCAGGTGAGGATCCACAGAAGAGTGTCATTATGCATACAGATGTTCAGCTTTACCTTAAGCATGCAATACCTAGTGTGACCTGCATGCCAAATTTGACTATAATGCCAGATTTGCCTCACACACAGTACACCGACCATCACAAAGAGTTTGTGAAGTGTGCTTCAGGCTTAATAGTGTACTACTTACCAAGAATTTCAAATGTATTCATACCACTAAATTACCAACGATAAGCAACTTTACTGTCAGCATATCAAGGCACCTAGAGTTGATCTGAAACCATTGCATTTGACTCTA
>TCONS_00041154
CTATTAACTCAGCATttgtctttatttaaatttttttcttctccatTTCTCCTTCTGAAGTGTAATGACCTTCATCTCAGAGACTCATTGTCATGTCCAGCTCATGATGGTCGTCTGATTGTCTTCAGCAACACAAAGACACCAGTGTTGAGCTGTTGATCTGCAGTATGTCAGAGGAGCAGGGAAAGATGagtctctcagagaaacacagTGTAATATCAGACTCATGTGTGTCCGGCTCTGTGTCTGTGAAGAGCGACTGCTCAAAAGATGGTGATCTCCCGAACTTCAGTGTGGAAAAGCCAATGTCTGCTAAAAGTGTAATATCAGACTCATGTGTGTCCGGCTCTGTGTCTGTGAAGAGCGACTGCTCAAAAGATGGTGATCTCCCGAACTTCAGTGTGGAAAAACAAACGTCTGCTAAAAGTGTAATATCAGACTCCTGTGTGTCCGGCTCTGTGTTTGTGAAGAGTGACTGCTCAAAAGATGGTGATCTCCCGAACTTCAGCGAGGAAACACCGTCATCTGGCAAAAGttttgaaCATAAGACATCAGACTCAGACTTCCAGACTCACAGGAAACACAAGGGGTTTCAAGACGGTCTTCTGGGGATCTTTCAGGATCTTGAAAACCAGATAATGAATTATCTGAAGCATGAGCTAGAAAAGTTTAAGAAAATCttacaaaaagaaaacataattGACTTTGTAAAGGACTTTAACGAGAACAGATGCAGCATCAAAGAAGCAGCTCTCGATCTCACACTCTACTTCCTGAGGGAAATGAAGCAAGAGGAAAGTGCTGATACTCTAGAAGACGAACTGATCTTCATTCATCAGCTGAAATGTGGCCTACAGAAGAAGTATCagtgtgtgtttgaaggaattgcacAGCAAGGAGATTCAAGACTTCTGAAgaacatctacacagatctctatatcactcagggtggCAGTGAACAGGTCAATACTGAACATGAGGTCAGACAGATTGAAGTTGCTTCTAGACGTCATGAAGCACAAGAGCTACAGGTTGAATGCAGACACTTGTTTGAAGCGTCTGAACAAGATAAGCAGATCAGAACTGTACTGACAAAAGGAGtcgctggcatcgggaaatcagtctctgtgcaaaagtttgttctggattgggctgaaggaaaagaaaatcaagagatcagcttcatatttcctcttccattcagagagatgaacttaaaggagaaagaaacaCTCAGTTTGATGGAGcttataactcagtttttcccggAGAcaaaaggactgaaccttacaagaaggaatcgattcaaagtcctgttcatccttgatggattggatgaatgtcgtcttcctctgaactttgctggtaatgagacgtgttgTGATGTTTCGTCGCCAgcctctctggatgttctcctgacgaacctcatcaagggaaatctgcttccttctgctctcatctggatcaccagcagaccagcagctgccagtaagattcctcctgactgtatcgaccggctgacagagatacgaggattcaatgatgcacaaaaagaggagtacttcagaaaaaGACTGACAGATGAGAATCAGGCCAAAGAAATCATTGATCATGTTAAACAATCAAAGAGTCTCTtcatcatgtgccacatcccagtcttctgctggatttcagccactgttctccaaaACATTTTACAGGAGAAGAGAAATAATGATGTTAAACACAATCAAGCTGATGACGCctccaaaacactgcaggaatCAAACACTGAAGAcactcccaagactctgacacagatgtacacacactttctgcgctttcagatccagcagagcagacgAAAGTATAATGGAGAATACACACCAGATGTGTCCTGGGATAAAGACgccatcctttcactggggaaactggcatTTCATCATCTGTTAAACAACAACCTAATCTTCTATGACACAGACCTGGAAGCCTGTGGTATTGACGTCTATAAGGCCTCAGtttactcaggcatgtgtacccagatctttaaggaggaaaCTGGgatcattcttggtaccatgtactgctttgtTCACCTGACTCTTCAAGAGTTTATCGCAGCCCTTTATGCACATCTGATTCTAGACACTAACAAGAAAAGTGTGTTTGATCAAgactctaaaaaaataaatgagtccatgattgatttgctgaagactgcagtggacaaggcACTAGAGAGTGACAATGGGCACCTGGACCTTTTtcttcgcttccttctcggtctgtcacttCAGTCCAATCGACGAATCTTACGAGGTCTGTTGACACCGCAAGACCAAGATGACCAAAGCACAGAGAAAATACTTCAGTATATCAAGCAGAAGTTTGATGCGAATCtttctccagagagatccatcaatctgttctactgtctgaatgaactgaacgaaCAAACTCTGGTGAAAGAGATTCAGACTCACCTTAGCAAAGGAAGTCTCTCATCTGCTGACTTTTCATCTGCCCACTGGTCTGCTTTGgcctttgtgttgttgacatcaGATGAGGAgatggaggagtttgagcttcagaaattccataaatcagacgagtgtctcatcagactatcagcagtcatcaaaacctgcaaaagagctctgtaa

Function

symbol description
nlrc7 Predicted to be involved in intracellular signal transduction.

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-478 Predicted to be involved in intracellular signal transduction.

Ensembl:

ensembl_id ENSDARG00000078234

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041153 False 4492 mRNA 0.42 17 9946793 9973918
TCONS_00041154 True 2642 mRNA 0.43 7 9965804 9974022

Neighbor

gene id symbol gene type direction distance location
XLOC_020909 si:dkey-253d23.9 coding downstream 11939 9926090 ~ 9934854 (-)
XLOC_020908 si:dkey-253d23.8 coding downstream 40003 9904253 ~ 9906790 (-)
XLOC_020907 znf991 coding downstream 45005 9898028 ~ 9901788 (-)
XLOC_020906 znf990 coding downstream 50613 9893111 ~ 9896180 (-)
XLOC_020905 si:dkey-253d23.5 coding downstream 56407 9886903 ~ 9890386 (-)
XLOC_020911 BX324216.2 coding upstream 41574 10015596 ~ 10019768 (-)
XLOC_020912 BX324216.3 coding upstream 63254 10037276 ~ 10051551 (-)
XLOC_020913 si:ch211-222k6.2 coding upstream 80314 10054336 ~ 10055744 (-)
XLOC_020914 BX324213.1 coding upstream 102556 10076578 ~ 10079669 (-)
XLOC_020915 si:dkey-102c8.2 coding upstream 111550 10085572 ~ 10086446 (-)
XLOC_020903 BX539307.3 non-coding downstream 120324 9824521 ~ 9826469 (-)
XLOC_020902 NA non-coding downstream 172750 9752170 ~ 9774043 (-)
XLOC_020901 BX664625.4 non-coding downstream 232462 9714214 ~ 9714331 (-)
XLOC_020897 NA non-coding downstream 631621 9278778 ~ 9315172 (-)
XLOC_020896 NA non-coding downstream 640991 9276356 ~ 9305802 (-)
XLOC_020919 NA non-coding upstream 242770 10216792 ~ 10222529 (-)
XLOC_020935 BX465868.1 non-coding upstream 683996 10658018 ~ 10660997 (-)
XLOC_020936 BX465868.3 non-coding upstream 693836 10667858 ~ 10667974 (-)
XLOC_020937 BX465868.2 non-coding upstream 699147 10673169 ~ 10675595 (-)

Expression


Co-expression Network