G113688


Basic Information

Item Value
gene id G113688
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11210473 ~ 11218154 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU130068
GCGATTTGCATAGATCTGTCGGTAAACCATTGGTACAGTGTCACCACACACAGTTAGAAGAAACACGTAAAACAGACTGAGCCCTCTCCCTCTTCAAATATAACTATGCCGGCACTCTTACAATGTGCATATGGTATTGTTAAATCGTATGTCCGTTCACTTGGTTATAAACTCTCACTGAAATATGACTAGTTGCATCCACGTCGCCTCAGGGGAACGGTATTTATAGATATACACTGAgcggacaaaacattaggaacacctgctctttccgtgacatagactgaccaggtgaatccagatgaaagatatgatcccttattgatgtcacttattataTCCACAtgaaatcagtgtagatgaaggggaaaagacagggtaaagaaagatttaagccttgagacaattgagacaaggattgtgtatgtgtgccatccaGAGGGTAAACGGGCAAGACAGAAGATTTAAGAgcgaggtatggtagtagatgccagacgcaccagtttgtgtcaagaactgcaaagctgctggggttttcacgctcaacagtttcctgtgtgtatcaagaatggtccaccacccaaaggacatccagccaacttgacacaactgtgggaagcattggagtcaacttgggccagcatccctgtggaacgctttcaacaccttgtagagtccatgttctGACGaaattcttaatgttttgtacactcagtatacagtgttcctaatgttttgtacactcagtatacagtgttcctaatgttttgtacactcagtatacagtgttcctaatgttttgtacactcagtatacagtgttcctaatgttttgtactctcagtatacagtgttcctaatgttttgtacactcagtatacagtgttcctaatgttttgtactctcagtatacagtgttcctaatgttttgtacactcagtataaagtgttcctaatgttttgtacactcagtatacagtgttcctaatgttttgtactctcagtatacagtgttcctaatgttttgtactctcagtataaagtgttcctaatgttttgtacactcagtatacagtgttcctaatgttttgtactctcagtatacagtgttcctaatgttttgtactctcagtagaaagtgttcctaatgttttgcaaaCTCAGTataaagtgttcctaatgttttgtacgctcagtATAAAGTGTTCTCAAACAACAGTCACTGAATCATGTTGGCACACTACCCTGGGTTTGTGATGATGCTCAGTATAACACAGGGAACGTCCTTGCTGTCTCATTCATCTcagaacccagaaccaaatcTTGCGTGCGCTGGCTAGCTACAGTCTGTTACCAGAGACGACTGTCTCACATCATGTTTGGCCTACCGTAGGGTTTGTTATTGTGCAGTGATGAGTAGTGACTGGAGTTTTTCCTCGAAGATGTGCCCAGAGAAAACTCTGGACCCAACCCACTGGGGACAGACATCAGTTcaaacgtctagttttgatttggTTTCAGATGttaactaacgtgaattcaacgtgaattCAACAAGACATTTCACCATATCGTTGGATTTATGCTAAAAAGTTGTGTAAAAATAGAaccagttttccacgttgattcaacgttaTCAAGATTGAATTTCTTTTGGGGTTGAAATGACGTAGAAACAACAACTGTtgcaaccagtttttgcccagtggggagTAATGTCATCCAGTCTGTTGGGAACGTGTGTTTGGACTGGTGACTAAACAGTTGGTCATCATGTAGTGTAGTCTTCATATAGTCTACAGGACTGTATACACCTATAGCCTTCAGTTCCACACAACAATTAACTGCCCAGGGCTTCAGTTCCACACAACAATTAACTGCCCAGGGCTTCAGTTCCACACAACAATTAACTGCCCGGGGCTTCAGTTCCACACAACAATTAACTGCCCAGGGCTTCAGTTCCACACAACAATGAACTGCCCAGGGCTTCAGTTCCACACAGCAATTAACTGCCCAGGGCTTCAGTTCCACACAACAATTAACTGCCCAGGGCTTCAGTTCCACACAACAATGAACTGCCCAGGGCTTCAGTTCCACACAACAATTAACTGCCCAGGGCTTCAGTTCCACACAACAATTAACTGCCCAGGGCTTCAGTTCCACACAACAATGAACTGCCCAGGGCTTCAGTTCCACACAGCAATTAACTGCCCAGGGCTTCAGTTCCACACAACAATTAACTGCCCAGGGCTTCAGTTCCACACAACAATTAACTGCCCAGGGCTTCAGTTCCACACGACAAGTAAAATCTCTAAAAACATCTCATTCGATTTAAGATTCGCTGCTGGAAAAAGTGTCACCCATTGAGGGAAtgtgtgGGACAGGAAATGACATCAGAGATGTTCTTTGCAACATCTGTGTTGGTCAGAGTCACATCTGAGCAGCAACATATGTATAGACAGTATTGCCCTACCATGCAAGAAGGCAATAACTGCTCATTTGGTCCAAAATGAGTTCATGTCAATTTTTTTGCTTCATTAAATACATtcttaatcatgtggacaagtatcctgcctcgGTTGTATAGTGTTCAGGAGAAAATGGGGGGTCATGTTAGCCAGTAACTGCATGAAGATACTGTGACACCAAGGTAGATAAAAGGTatttttctcagttccacgcTATGAGCAGTTAATGTCTTTTTGCTTGGTCGGGCAGAGTATCATCTGAAGGGgacacacacatccacaacacACACTCAGGGAGGCTTGGATTTGTTGGAGACACACACCAGGGACAGAGAACCGTGGTCAAACAGCCTGTACGGCAACGTCCCCTTCGTCGTCCACGCGTCAGTCTTCGGGTCGTAGCACTCGAAGCTGTCGGAGTCCTCTATGACGTCGTGTCCGTTGATGAAGCGTCCTCCGGTCACGTACAGTTTGTCGTCGAGCACCGCCACGGCGTGATGCATCCTCCTCTGCTTCAGGTTCTCACACTTCGTAAAGCGGTTGGCTTTGGTGTCGTACGCGATCATTCTTCTGGTGT

Function

NR:

description
kelch-like protein 38

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU130068 True 3044 TUCP 0.44 3 11210473 11218154

Neighbor

gene id symbol gene type direction distance location
lratd2b LOC106573048 coding downstream 41835 11165113 ~ 11168638 (-)
LOC118937688 NA coding downstream 151000 11058263 ~ 11060049 (-)
LOC110511734 LOC105023503 coding downstream 209351 10840566 ~ 11001122 (-)
LOC118937685 NA coding downstream 329083 10879856 ~ 10881390 (-)
LOC110512108 rad21 coding downstream 384461 10811513 ~ 10826012 (-)
prelid3a LOC106593866 coding upstream 29883 11196145 ~ 11261793 (-)
LOC110514530 LOC106572903 coding upstream 179938 11398092 ~ 11402862 (-)
LOC110513475 LOC106592216 coding upstream 253785 11471939 ~ 12290710 (-)
LOC118937712 NA coding upstream 366054 11584208 ~ 11585455 (-)
LOC118937710 NA coding upstream 367405 11585559 ~ 11586577 (-)
G113675 NA non-coding downstream 31744 11174887 ~ 11178729 (-)
G113673 NA non-coding downstream 38117 11172152 ~ 11172356 (-)
G113672 NA non-coding downstream 39753 11170141 ~ 11170720 (-)
G113671 NA non-coding downstream 41324 11168947 ~ 11169149 (-)
G113669 NA non-coding downstream 52723 11157517 ~ 11157750 (-)
G113693 NA non-coding upstream 16581 11234735 ~ 11235169 (-)
G113698 LOC106606161 non-coding upstream 51301 11269455 ~ 11278174 (-)
G113701 NA non-coding upstream 61151 11279305 ~ 11286148 (-)
G113716 NA non-coding upstream 99711 11317865 ~ 11318567 (-)
G113721 NA non-coding upstream 107576 11325730 ~ 11326367 (-)
G113096 NA other downstream 188739 11021041 ~ 11021734 (-)
eif3h LOC100196680 other downstream 402229 10736729 ~ 10808244 (-)
G112965 NA other downstream 491815 10648265 ~ 10718658 (-)
G112928 NA other downstream 639665 10570442 ~ 10570808 (-)
G112567 NA other downstream 863538 10346471 ~ 10346935 (-)
G113712 NA other upstream 92689 11310843 ~ 11312658 (-)
G113720 NA other upstream 104887 11323041 ~ 11325612 (-)
G113733 LOC106606124 other upstream 131188 11349342 ~ 11352741 (-)
G114390 NA other upstream 1365873 12584027 ~ 12585140 (-)

Expression


Co-expression Network