G113233



Basic Information


Item Value
gene id G113233
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11230566 ~ 11231000 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU129416
ctctctctttctctctctgctctctttctctctgctgtttctgtctctctctgctgtttctgtctctgctgtctctctctctctctgggccttaTCACTTCTCTCCAGACAAGAGGCTCTTTGGAGATATTCTCTTAACTCACAGCGGCCtgtgagggagcgagagagactctgtgagggagagagagatacggtGTGTGTTTGGTGGTCTGCTTtgaacacatctctctctctctgttgatttAAAAGATAACTAGATTATTCTGAACAGTAAGTACAGACGATCATCAGAATAATATCTTAGGTAATCTGATCAGGTTTACCCCACACGATCAGGTTTACCCCACACCGTTTACCCCACACCGTTTACCCCACACCGTTTACCCCACACCGTTTACCCCATACCGTTTACCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU129416 True 414 lncRNA 0.36 2 11230566 11231000

Neighbor


gene id symbol gene type direction distance location
LOC110512016 LOC106564714 coding upstream 19354 11202887 ~ 11211212 (+)
nsmce2 LOC106606151 coding upstream 133102 11084361 ~ 11097464 (+)
washc5 kiaa0196 coding upstream 147468 11031992 ~ 11083098 (+)
LOC110507508 LOC106605488 coding upstream 520206 10626586 ~ 10710360 (+)
LOC110535244 ctnnb1 coding upstream 827921 10366101 ~ 10402645 (+)
elovl4a LOC106606161 coding downstream 29912 11260912 ~ 11275480 (+)
LOC118944054 NA coding downstream 43681 11274681 ~ 11277557 (+)
LOC110520740 LOC106592347 coding downstream 76174 11307174 ~ 11324807 (+)
soga3a LOC106593623 coding downstream 97026 11328026 ~ 11373000 (+)
echdc1 echdc1 coding downstream 161942 11392942 ~ 11397308 (+)
G113210 NA non-coding upstream 57759 11172577 ~ 11172807 (+)
G113209 NA non-coding upstream 58217 11172041 ~ 11172349 (+)
G113208 NA non-coding upstream 58925 11171378 ~ 11171641 (+)
G113207 NA non-coding upstream 59453 11170905 ~ 11171113 (+)
G113205 NA non-coding upstream 63707 11165187 ~ 11166859 (+)
G113234 NA non-coding downstream 174 11231174 ~ 11231475 (+)
G113236 NA non-coding downstream 2862 11233862 ~ 11234335 (+)
fbxo32 fbxo32 non-coding downstream 11592 11227497 ~ 11243074 (+)
G113199 NA non-coding downstream 12710 11243710 ~ 11245562 (+)
G113200 NA non-coding downstream 14613 11245613 ~ 11247356 (+)
G112697 NA other upstream 404503 10811518 ~ 10826063 (+)
LOC118937659 NA other upstream 1454115 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 1506695 9701990 ~ 9742723 (+)
G111788 NA other upstream 1786525 9440309 ~ 9444041 (+)
G111453 NA other upstream 1898950 9330269 ~ 9331616 (+)
G113285 NA other downstream 183931 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 246976 11477976 ~ 11482741 (+)
G113396 NA other downstream 477603 11708603 ~ 11709777 (+)

Expression



Co-expression Network