G113234


Basic Information

Item Value
gene id G113234
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11231174 ~ 11231475 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU129417
GGTTTACCCCACAGGTTTACCCCACACTGATCAGGTTTACCCCACAGGTTTACCCCACACCGATCAGGTTCACCCCACACCGATCACCCCACAGCGATCAGGTTTACCCCACACCGATCACCCCACAGCGATCATGTTTACCCCACAGCGATCAGGTTTACCCCACACCGATCACCCCACACCGATCACACCGATCACCCCACACGATCAGGTTCACCCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129417 True 222 lncRNA 0.36 2 11231174 11231475

Neighbor

gene id symbol gene type direction distance location
LOC110512016 LOC106564714 coding upstream 19962 11202887 ~ 11211212 (+)
nsmce2 LOC106606151 coding upstream 133710 11084361 ~ 11097464 (+)
washc5 kiaa0196 coding upstream 148076 11031992 ~ 11083098 (+)
LOC110507508 LOC106605488 coding upstream 520814 10626586 ~ 10710360 (+)
LOC110535244 ctnnb1 coding upstream 828529 10366101 ~ 10402645 (+)
elovl4a LOC106606161 coding downstream 29437 11260912 ~ 11275480 (+)
LOC118944054 NA coding downstream 43206 11274681 ~ 11277557 (+)
LOC110520740 LOC106592347 coding downstream 75699 11307174 ~ 11324807 (+)
soga3a LOC106593623 coding downstream 96551 11328026 ~ 11373000 (+)
echdc1 echdc1 coding downstream 161467 11392942 ~ 11397308 (+)
G113233 NA non-coding upstream 174 11230566 ~ 11231000 (+)
G113210 NA non-coding upstream 58367 11172577 ~ 11172807 (+)
G113209 NA non-coding upstream 58825 11172041 ~ 11172349 (+)
G113208 NA non-coding upstream 59533 11171378 ~ 11171641 (+)
G113207 NA non-coding upstream 60061 11170905 ~ 11171113 (+)
G113236 NA non-coding downstream 2387 11233862 ~ 11234335 (+)
fbxo32 fbxo32 non-coding downstream 11117 11227497 ~ 11243074 (+)
G113199 NA non-coding downstream 12235 11243710 ~ 11245562 (+)
G113200 NA non-coding downstream 14138 11245613 ~ 11247356 (+)
G113238 NA non-coding downstream 22393 11253868 ~ 11254504 (+)
G112697 NA other upstream 405111 10811518 ~ 10826063 (+)
LOC118937659 NA other upstream 1454723 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 1507303 9701990 ~ 9742723 (+)
G111788 NA other upstream 1787133 9440309 ~ 9444041 (+)
G111453 NA other upstream 1899558 9330269 ~ 9331616 (+)
G113285 NA other downstream 183456 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 246501 11477976 ~ 11482741 (+)
G113396 NA other downstream 477128 11708603 ~ 11709777 (+)

Expression


Co-expression Network