G113236


Basic Information

Item Value
gene id G113236
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11233862 ~ 11234335 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU129420
gggggggtgctgaCAATGGTCACATGTCCTGTCCAGACTGGTGTAAGGACCAGTTTCTCCATGGTGTCAGTAGCTGTGTCTGTTGTTGCATGCCACACATGCCACCCCTGTCCTGGCCGTGGTGTACACTGTGTTGGACTAGATGCTGTGGTGTACACTGTGTTGGACTAGATGCTGTGGTGTACACTGTGTTGGACTAGATGCTGTGGTGTACACTGTGTTGGACTAGAGACACCCTGCCCCAGCCAGGGCTTGGGCAAGACAACCTGCCCCAGCCAGTGGGAACAGTGTTCTAGTGGC

Function

NR:

description
PREDICTED: kelch-like protein 38 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129420 True 300 lncRNA 0.39 2 11233862 11234335

Neighbor

gene id symbol gene type direction distance location
LOC110512016 LOC106564714 coding upstream 22650 11202887 ~ 11211212 (+)
nsmce2 LOC106606151 coding upstream 136398 11084361 ~ 11097464 (+)
washc5 kiaa0196 coding upstream 150764 11031992 ~ 11083098 (+)
LOC110507508 LOC106605488 coding upstream 523502 10626586 ~ 10710360 (+)
LOC110535244 ctnnb1 coding upstream 831217 10366101 ~ 10402645 (+)
elovl4a LOC106606161 coding downstream 26577 11260912 ~ 11275480 (+)
LOC118944054 NA coding downstream 40346 11274681 ~ 11277557 (+)
LOC110520740 LOC106592347 coding downstream 72839 11307174 ~ 11324807 (+)
soga3a LOC106593623 coding downstream 93691 11328026 ~ 11373000 (+)
echdc1 echdc1 coding downstream 158607 11392942 ~ 11397308 (+)
G113234 NA non-coding upstream 2387 11231174 ~ 11231475 (+)
G113233 NA non-coding upstream 2862 11230566 ~ 11231000 (+)
G113210 NA non-coding upstream 61055 11172577 ~ 11172807 (+)
G113209 NA non-coding upstream 61513 11172041 ~ 11172349 (+)
G113208 NA non-coding upstream 62221 11171378 ~ 11171641 (+)
fbxo32 fbxo32 non-coding downstream 8257 11227497 ~ 11243074 (+)
G113199 NA non-coding downstream 9375 11243710 ~ 11245562 (+)
G113200 NA non-coding downstream 11278 11245613 ~ 11247356 (+)
G113238 NA non-coding downstream 19533 11253868 ~ 11254504 (+)
G113241 NA non-coding downstream 25404 11259739 ~ 11260059 (+)
G112697 NA other upstream 407799 10811518 ~ 10826063 (+)
LOC118937659 NA other upstream 1457411 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 1509991 9701990 ~ 9742723 (+)
G111788 NA other upstream 1789821 9440309 ~ 9444041 (+)
G111453 NA other upstream 1902246 9330269 ~ 9331616 (+)
G113285 NA other downstream 180596 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 243641 11477976 ~ 11482741 (+)
G113396 NA other downstream 474268 11708603 ~ 11709777 (+)

Expression


Co-expression Network