G113693



Basic Information


Item Value
gene id G113693
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11234735 ~ 11235169 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU130074
GGAGGTGTCTCCACGTCTCTATCAGCAGACTGTTGGAACAGAGGAGGTGTCTCCACGTCTCTATCAGCAGACTGTTGGAACGGAGGAGGTGTCTCCTCGTCTCTaactatcatcagactgttggaaCGGAGGAGATGTCTCCTGGTCTCTATCATCACACTTTTGGAACAGAGGTGGTGTCTCCACGTCTCTaactatcatcagactgttggaaCGGAGGAGGTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU130074 True 225 lncRNA 0.51 2 11234735 11235169

Neighbor


gene id symbol gene type direction distance location
lratd2b LOC106573048 coding downstream 66097 11165113 ~ 11168638 (-)
LOC118937688 NA coding downstream 175262 11058263 ~ 11060049 (-)
LOC110511734 LOC105023503 coding downstream 233613 10840566 ~ 11001122 (-)
LOC118937685 NA coding downstream 353345 10879856 ~ 10881390 (-)
LOC110512108 rad21 coding downstream 408723 10811513 ~ 10826012 (-)
prelid3a LOC106593866 coding upstream 12868 11196145 ~ 11261793 (-)
LOC110514530 LOC106572903 coding upstream 162923 11398092 ~ 11402862 (-)
LOC110513475 LOC106592216 coding upstream 236770 11471939 ~ 12290710 (-)
LOC118937712 NA coding upstream 349039 11584208 ~ 11585455 (-)
LOC118937710 NA coding upstream 350390 11585559 ~ 11586577 (-)
G113680 NA non-coding downstream 20865 11189088 ~ 11213870 (-)
G113675 NA non-coding downstream 56006 11174887 ~ 11178729 (-)
G113673 NA non-coding downstream 62379 11172152 ~ 11172356 (-)
G113672 NA non-coding downstream 64015 11170141 ~ 11170720 (-)
G113671 NA non-coding downstream 65586 11168947 ~ 11169149 (-)
G113698 LOC106606161 non-coding upstream 34286 11269455 ~ 11278174 (-)
G113701 NA non-coding upstream 44136 11279305 ~ 11286148 (-)
G113716 NA non-coding upstream 82696 11317865 ~ 11318567 (-)
G113721 NA non-coding upstream 90561 11325730 ~ 11326367 (-)
G113725 NA non-coding upstream 100801 11335970 ~ 11337267 (-)
G113688 NA other downstream 16581 11210473 ~ 11218154 (-)
G113096 NA other downstream 213001 11021041 ~ 11021734 (-)
eif3h LOC100196680 other downstream 426491 10736729 ~ 10808244 (-)
G112965 NA other downstream 516077 10648265 ~ 10718658 (-)
G112928 NA other downstream 663927 10570442 ~ 10570808 (-)
G113712 NA other upstream 75674 11310843 ~ 11312658 (-)
G113720 NA other upstream 87872 11323041 ~ 11325612 (-)
G113733 LOC106606124 other upstream 114173 11349342 ~ 11352741 (-)
G114390 NA other upstream 1348858 12584027 ~ 12585140 (-)

Expression



Co-expression Network