G113200


Basic Information

Item Value
gene id G113200
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11245613 ~ 11247356 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU129369
CCTGGAGAAACTGCCGTATGAGAATGTTGTGATAGATTCCTGGAGAACCTTCCATAAGAGAATGTTGTGACAGATTCCCTGGAAGAACCTTCCATAAGAGAATGTTGTGACAGATTCCCTGGAAGAACCTTCCGTAAGAGAATGTTGTGACATATTCCCTGGAAGAACCTTCCGTAAGAGAATGTTGTGACAGATTCCCTGGAAGAACCTTCCATAAGAGAATGTTGTGACAGATTCCCTGGAAGAACCTTCCATAAGAGAATGCTGTGACAGATTCCCTGGAAGAACCTTCCATAAGAGAATGTTGTGATAGATTCCTGGAGAACCTCCCATAAGATAATGTTGTGACAGATTCCCTGGAAGAACCTTCCGTAAGAGAATGTTCTGATAGCTTCCTGGAGAAACTGCCGTATGAGAATGTTGTGATAGATTCCTGGAGAACCTCCCATAAGATAATGTTGTGATAGATTCCTGGATGAACCTTCCAATATGAGATACTTCATACAGTGTATAGCAGCAGATCATTTCCATAGCAAATACCATCCGCATTTCATATGGAGAATGACGTTTTGTAGCTTTTATATGTAATTCACACTACATATGCACCCTAAATAGCATCCTAAATGGCATCCTAAATGTCGTCCTAAATAGCATCCTAAATGTCATCCTATATAGCATCATAAATAGCATCCTAAATAGCATCCTAAATGTCATCCTAAATGTCATCCTATATAGCATCCTAAATGTCATCCTAAATGTCGTCCTAAATAGCATCCTAAATGTCATCCTATATAGCATCTTAAATGTCATCCTATATAGCATCCTAAATGTCATCCTATATAGCATCCTAAATGTCATCCTATATAGCATCCTAAATGTCATCCTAAATGTCATCCTATATAGCATCCTAAATGTCATCCTATATAGCATCCTAAATGTCATCCTATATAGCATCCTAAATGTCATCCTATATAGCATCCTAAATGTCATCCTATATAGCATCCTAAATGTCATCCTATATAGCATCCTAAATGTCATCCTAAATGTCATCCTATATAGCATCCTAAATGTCATCCTAAATGTCATCCTAAatggcatcctaaatggcacGCAACCTACATCTATCATAGACCTTTGTATCCAATCAATATCCTCCTGGACATTAACGTTGGCCTCAATCCCTCAGTAGGGAAACCTTTCTGTGGAAGGATCAATGATCGCAGTCTTTCTGATGATATATTAATAACCCTCGTGTTTCTATTGATCGTCGACTTGACAGCAGCAACATTCTTTATGGGCATGGAGGAGGGTTGTGATGCCCTCTATGGAGCCTGGTCACCAGGGAGGGTTGGGAGGAGGGTTGTGATGCCCTCTATGGAGCCTGGTCACCAGGGAGGGTTGTGATGCCCTCTATGGAGCCTGGTCACCAAGGAGGGTTGTGATGAGGGTTGTGATGCCCTCTATGAAGCCTGGTCACCAGGGAGGGTTGTGATGAGGGTTGTGATGCCCTCTATGAAGCCTGGTCACCAGGGAGGGTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129369 True 1540 lncRNA 0.42 2 11245613 11247356

Neighbor

gene id symbol gene type direction distance location
fbxo32 fbxo32 coding upstream 2539 11227497 ~ 11243074 (+)
LOC110512016 LOC106564714 coding upstream 34401 11202887 ~ 11211212 (+)
nsmce2 LOC106606151 coding upstream 148149 11084361 ~ 11097464 (+)
washc5 kiaa0196 coding upstream 162515 11031992 ~ 11083098 (+)
LOC110507508 LOC106605488 coding upstream 535253 10626586 ~ 10710360 (+)
elovl4a LOC106606161 coding downstream 13556 11260912 ~ 11275480 (+)
LOC118944054 NA coding downstream 27325 11274681 ~ 11277557 (+)
LOC110520740 LOC106592347 coding downstream 59818 11307174 ~ 11324807 (+)
soga3a LOC106593623 coding downstream 80670 11328026 ~ 11373000 (+)
echdc1 echdc1 coding downstream 145586 11392942 ~ 11397308 (+)
G113199 NA non-coding upstream 51 11243710 ~ 11245562 (+)
G113236 NA non-coding upstream 11278 11233862 ~ 11234335 (+)
G113234 NA non-coding upstream 14138 11231174 ~ 11231475 (+)
G113233 NA non-coding upstream 14613 11230566 ~ 11231000 (+)
G113238 NA non-coding downstream 6512 11253868 ~ 11254504 (+)
G113241 NA non-coding downstream 12383 11259739 ~ 11260059 (+)
G113197 NA non-coding downstream 25765 11273121 ~ 11300282 (+)
G113256 NA non-coding downstream 56924 11304280 ~ 11305549 (+)
G113258 NA non-coding downstream 63804 11311160 ~ 11312084 (+)
G112697 NA other upstream 419550 10811518 ~ 10826063 (+)
LOC118937659 NA other upstream 1469162 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 1521742 9701990 ~ 9742723 (+)
G111788 NA other upstream 1801572 9440309 ~ 9444041 (+)
G113285 NA other downstream 167575 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 230620 11477976 ~ 11482741 (+)
G113396 NA other downstream 461247 11708603 ~ 11709777 (+)
G114243 NA other downstream 1473052 12720408 ~ 12720693 (+)

Expression


Co-expression Network