XLOC_020911 (BX324216.2)


Basic Information

Item Value
gene id XLOC_020911
gene name BX324216.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 10015596 ~ 10019768 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041155
ATGAAAAggcacactggagagaggccataCATGTGTGatcagtgcgggaagagttttgCGCATAAAGGAAATCTTAACGCGCACATGAAAATACACACAGGAGAGAAGCCGTATGCGTGTAATGAATGCGGGAAGAGATTCAAACAAAAGCAAATATTCAACGATCACAttaaaatccacactggagagaggccgcaCAAGTGTGCTCAGTGCGGGAGGAGTTTCACACAAAAGGGAGCCCTTAATGcacacatgaaaatccacaccggagagaagccgcaTTCATGCGAGcaatgcgggaagagtttcacacGGAGACAGAACCTTACCGATCACATAAAAATCCACACCGGAGAAAATCTGCACACTTGTgatcaatgtgggaagagtttcctaAAGTCATGCGTTTTAAAAGAGCATCTGCGTACTCATTCAAGAGAAAGACTGTTTAACTGTGACCAGTGCAGTAAGAAATTCTTTAGAGCCGATGCCTTGAAGGATCACCTGAGAGTTCACACACAGGAGAAGCCTTACATATGTTCCTTTTGCGCAAAGGGTTTTAGACAGATGGGCAATTTAAAAATGCACCAGAAAAGACACAGCGGTGTGAAGGATCATATGTGCACTGAGTGTGGGAAGACTTTCTTTACAGATTATGAGCTTAGAGTACACCAGAGCGCTCATACTGGAGAAAAACCTtataagtgttcacactgtgacaagaccTTTAAACGGCCTGAATATCTGAAAATACATGagaggatccacaccggagaaaagCGATATCGCTGCGATTCTTGTGGGAAGAGGTTCACGCAGTTATCTTCTCTACTCGGTCATACGAGAAATGCTTGCTTGAAATCACATTTGATGGGGTCCAAGTTTCCTGTAGATCAAATAGTAGAGCATGGTGCTAGCAATGCCGAGGTTGATGGTATGATCCCAGCGGAAAGCAACTCAGCAACTGAGAAAATGTGTGCCTTCAATGCAATACAAGTTGTTTTAGATTAAAGCGTCTCCTAAATATAAAAATGAGCATAATGTAACTATTAGCTTTGCTAGTTTATTGTTAAACCACTCTAGTCCAATATTTCAGTATTGTATAATGAttatatacattttcattatgTCAAATTTTCATTCTTACATCCTTATTTGGTCTGTTATTTTGTCAAGTTGGCAAAATTTTGTTGGTTATTTGCACAGAGAAAATTTTTATAATACTTCAGTGACTGAAAATTAACATGCAGTAAAAATTGTTAGCTCAATCAATAGTTTGAGATCATTTTGAAAGGTGTGActcaaaaaagtttaaattagtCTAATATTAGTCTCTCATCTTGTAAAATTTGAATATGTGaatatgaaaatgaaagtgaaagtaaaacatCAATGCTTTCAAAAGCTGTTTTAGTGCCATGCAGTTTGATATTGAAATCATCTATGTaatatttgtgtaatttatttttctgcttCAAATTTTCACAtgaatttttatatattgtaaaaacaatgttatttatttagtttgggAACTTATGACTGAATGTTATGATTTTTTATTCACTGCTTCTTTTGAAGGCTCATCTATCAACCATATTATGTTTGCAGTTTGCACTTAAGCATCTCTTAAATGTTTCACTTTACTTGATACTTGTTTACAATTCATATCTTTGTTCTAAATGTTTTACGTCAAGTTCTATGTAACATGTCCATGAGTcatgttattttttgtaaaaaactaTTCTGTTAGCGcagcgtatttatttgtttgtttggcttGATTTAATTTTTTCCCATTTAAAAGAATGGAGATTtaagtttcattttattaatatgccaaagtatatttatattttggtcacactttacaataaggttgcattagcAAATGTTAGTTAAAGTATttactaatatattattaaaatccaaattccctcttaacattatttaatcactgtaagttaacatgaactaactttattcccattaactaatattaacaaagattaataaacatGGTAATAAGTCTATcgttcattgtttatttatgtaagtaAATACATAACTTATATTAGTAgtaaactaacattaactagtACAACcgcattgtaaagtgttaccttaattttttaagttatatgtTTTAAGTTAATGCATTGCCAAGTTTATAGGTTGACAttgttttttcattaatttataataacaGAATTTGCCTCTGACCCTGTTGCTTCTTTAATGTTTGtgaatttaaatgataaattccTGTTGTTTTGGTTTAGCATttctatttaatgtatttttttatatatataataaaaaataatagtattttC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105075

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041155 True 2336 mRNA 0.33 2 10015596 10019768

Neighbor

gene id symbol gene type direction distance location
XLOC_020910 nlrc7 coding downstream 41574 9946793 ~ 9974022 (-)
XLOC_020909 si:dkey-253d23.9 coding downstream 80742 9926090 ~ 9934854 (-)
XLOC_020908 si:dkey-253d23.8 coding downstream 108806 9904253 ~ 9906790 (-)
XLOC_020907 znf991 coding downstream 113808 9898028 ~ 9901788 (-)
XLOC_020906 znf990 coding downstream 119416 9893111 ~ 9896180 (-)
XLOC_020912 BX324216.3 coding upstream 17508 10037276 ~ 10051551 (-)
XLOC_020913 si:ch211-222k6.2 coding upstream 34568 10054336 ~ 10055744 (-)
XLOC_020914 BX324213.1 coding upstream 56810 10076578 ~ 10079669 (-)
XLOC_020915 si:dkey-102c8.2 coding upstream 65804 10085572 ~ 10086446 (-)
XLOC_020916 gls2b coding upstream 78678 10098446 ~ 10121880 (-)
XLOC_020903 BX539307.3 non-coding downstream 189127 9824521 ~ 9826469 (-)
XLOC_020902 NA non-coding downstream 241553 9752170 ~ 9774043 (-)
XLOC_020901 BX664625.4 non-coding downstream 301265 9714214 ~ 9714331 (-)
XLOC_020897 NA non-coding downstream 700424 9278778 ~ 9315172 (-)
XLOC_020896 NA non-coding downstream 709794 9276356 ~ 9305802 (-)
XLOC_020919 NA non-coding upstream 197024 10216792 ~ 10222529 (-)
XLOC_020935 BX465868.1 non-coding upstream 638250 10658018 ~ 10660997 (-)
XLOC_020936 BX465868.3 non-coding upstream 648090 10667858 ~ 10667974 (-)
XLOC_020937 BX465868.2 non-coding upstream 653401 10673169 ~ 10675595 (-)

Expression


Co-expression Network