G113698 (LOC106606161)


Basic Information

Item Value
gene id G113698
gene name LOC106606161
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11269455 ~ 11278174 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU130088
acaggcATTCTGTTTATTTTGTATCTGTGAGTTTTGAAATAAGTCATGATCATTTTGAAAAGAACGTGCAAGAGAAATATCTGCCTCATCGTGGCATTCAGTTGGGAACTtttccgcccccccccccccccccccaaaagcacaaaatgtacaaaatcaCACAGCGTTTAATATATACAACACGCCAAtaatatacaaataaaaaaaagtctTCAAGAACACTGAAACACAGACAAGCACTTTGCCATTCAGAAGGAGAAGAAAACAACTATTTATATTTAAGACAGGAACAATACAAAtctataaaaaaaacaagaaataacgTTATTATTACATGACGTGATACCATGGTTGAATTTGCTGCTCTTAGAGTAGACTGCGTCGCGTTGTACTCTACACGTGTCACGGTTAGGTAGAGCACACGGTCCTTCAgtagcagtatatatatacagtacactaacTAAACACATTGACCAGCTGATATTGCCTAAACAGCGTATCAAATCAATCCAGCAATCGATCATTCGATTTGATTGGTTGATAAAACAGCGTCTCCCAGTTGACTAGTTGGTTGATTTGCCCTGAAATTGCCCTGAAATTCCATAGCAGCGTCTTCACAGTTACTGTATGTCTACTTGGCTCTGCTCAACAGCTCCACGTTCACTGAGTAAGACAACTAGTGATATTGTATGTGGAGGCAGCCAGGACAGaacagtgaaataaaaaaaacaagaaaacattTCGGACGAAATTCCACTGTCTCTAACCAAATGTAGCTTCTAGATTCCACTGTCTCTAACTGAATGTCTCTTCTAGATTCCAATGTCTCTTCTAGATTCCACTGCCTCTAACTGAATGTCTCTTCTAGATTCCACTGTCTCTAACGGAATGTCTCTTCTAGATTCCACTGCCTCTAACCGAATGTCTCTTCTAGATTCCACTGTCTCTAACCAAATGTAGCTTCTAGATTCCACTGTCTCTAACTGAATGTCTCTTCTAGATTCCAATGTCTCTTCTAGATTCCACTGCCTCTAACTGAATGTCTCTTCTAGATTCCACTGTCTCTAACGGAATGTCACTTCTAGATTCCACTGTCTCTAACCGAATGTCTCTTCTAGATCCCACTGTCTCTAACTGAATGTCTCTTCTAGATTCCACTGCCTCTAACCGAATGTCTCTTCTAGATCCCACTGTCTCTAACTGAATGTCGCTTCTAGATTCCACTGTCTCTAACCGAATGTCTCTTCTAGATTCCACTGTCTCTTCTAGATCCCACTGTCTCTAACTGAATGTCTCTTCTAGATTCCACTGTCTCTTCTAGATTCCACTGTCTCTGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCTCTTCTAGATTCCACTGCCTCTAACTGAATGTCACTTCTAGATTCCACTGTCTCTAACCGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCTCTTCTAGATTCCACTGCCTCTAACAGAATGTCTCTTCTAGATTCCACTGCCTCTAACTGAATGTCTCTTCTAGATTCCACTGTCTCTAACCGAATGTCACTTCTAGATTCCACTGTCTCTAACCGAATGTCTCTTCTAGATTCCACTGTCTCAAACCGAATGTCACTTCTAGATTCCAATGTCTCATACCGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCTCTTCTAGATTCCACTGTCTCTAACCGAATGTCTCTTCTAGATTCCACTGTCTCAAACCGAATGTCACTTCTAGATTCCAATGTCTCAAACCGAATGTCACTTCTAGATTCCACGGTCTCTAACCGAATGTCACTTCTAGATTCCACGGTCTCTAACCGAATGTCACTTCTAGATTCCACTGTCTCTAACCGAATGTCACTTCTAGATTCCGCTGTCTCTAACCGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCACTTCTAATAATAATGAGTGATGCTTTTTATTAGCATGTACAGTAAGTAAACAAGTCTAACTGGCCAAGTTGTAATTGGATAAAGCTTAGCTTGCATTTCAAGAGctccatttttttttaatgcaatCTCAACATGTGGCTAGGATTGCCAACAGCTGAGTCTGTCTTATTGAGAAAAATGAACAATTACATCATGTATGGGGCATGTAAACTGAccgatctctatctctctctctctgcttatgGCAACAGTGTGGGTGGGCTGAAGAATTCAATGGCCTACCTCACATAATATGAATCAACAAATCTGGACAAAGGACAAAAATGACAGTATGAGTAAGTCATATTCTTTAAAAGGCATACGTACACAATGAATGTTtaaactatgtgtgtgtgtgtggtgtgttcctGTCTCTAGATAGCAGTGTAACTGTTACCAGTGGGTTAGCTAGCTACACACCAGTGAATCAGCTAGCTACACACCAGTGAATCAGCTAGCTACAAACCAGTGGGTTAGCTAACTACAAACCAGTGGGTTAGCTAGCTACACCCCAGTGAATCAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACACCCCAGTGAATCAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACACACCAGTGGGTTAGCTAGCTACACCCCAGTGAATCAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACAAACCAATGGGTTAGCTAGCTACAAACCAGGGAATCGGCTAGCTACACACCAATGAATCAGCTAGCTACAAACTAGTGAATCAacgagttagctagctacaaaccAGTGGGTTAGTTAGCTAAACACCAGTGAATCAGCTAACTAAACACCATTAAATCAGCTAGCTACAAACCAgtgagttagctagctacaagcCAGTCGGTCAGCTAGCTACAAACCAGTCGGTCAGCTAGCTACAAACCAGTCGGTCAGCTAGCTACAAACCAGTCGGTTAGCTAGCTACAAACCTCAACActgcagtacagagagagaacatgttgaTGTTATTGTTTTCCAGACCAGAAACTACTGAAAGTTGGATTAGTTGTAATGACGGTCACCTTGGACACGTCGCGACCTCTTGCCAGGGTTGGGGTTATTTCCCTTTCAATTCAGCCAAACGCAGAAAGTTAACTGAAATTCAAATTTTCCCCAATCAAAGCCCATGAGGAAAATTGTAAATTTTGAATGTCACagattgactgaattgaaatggaattgactccaGCCTTGCCTCTTACCACACCTTCACCTACAAGTCATgtgctgtatagggaatagggtgctatgtgGGAGGTATAATAAGATCAAACAGCAAGGCCTGTTAGTGCCAGCCTGTCTGAGATATTGTGACTATAATTGATGAGTGGAGAAAAAAacgttgtaacgtaacaaaatgtggaataaggggTCTGATTTCTTCCCGAATGCTCTGTACAGTACGACAGGGCTATTCAACTGAGGACATGTAGAAGGCAATCTGAGGGAAAAAGATGAAACACAACCTTTCTGGCTTTCATGATCTCTCCAGGGTAGAGAAGATGACCAGATGGT
>TU130089
TCACTTCTAGATTCCACTGTCTCTAACCGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCTCTTCTAGATTCCACTGCCTCTAACAGAATGTCTCTTCTAGATTCCACTGCCTCTAACTGAATGTCTCTTCTAGATTCCACTGTCTCTAACCGAATGTCACTTCTAGATTCCACTGTCTCTAACCGAATGTCTCTTCTAGATTCCACTGTCTCAAACCGAATGTCACTTCTAGATTCCAATGTCTCATACCGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCTCTTCTAGATTCCACTGTCTCTTCTAGATTCCACTGTCTCTGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCTCTTCTAGATTCCACTGCCTCTAACTGAATGTCACTTCTAGATTCCACTGTCTCTAACCGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCTCTTCTAGATTCCACTGCCTCTAACTGAATGTCTCTTCTAGATTCCACTGCCTCTAACTGAATGTCTCTTCTAGATTCCACTGTCTCTAACCGAATGTCACTTCTAGATTCCACTGTCTCTAACCGAATGTCTCTTCTAGATTCCACTGTCTCAAACCGAATGTCACTTCTAGATTCCAATGTCTCATACCGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCACTTCTAGATTCCACTGTCTCTAACCGTATGTCGCTTCTAGATTCCGCTGTCTCTAACCGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCACTTCTAGATTCCGCTGTCTCTAACTGAATGTCACTTCTAGATTCCGCTGTCTCTAACTGAATGTCGCTTCTAGATTCCACTGTCTCTAACTGAATGTCACTTCTAGATTCCACTCTCTAACCGAATGTCACTTCTAGATTCCACTGTCTCTAACCGAATGTCTCTTCTAGATTCCACTGTCTCGAACCGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCTCTTCTAGATTCCACTGTCTCTAACTGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCTCTTCTAGATTCCACTGTCTCTAACTGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCTCTTCTAGATTCCACTGTCTCTAACCGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCTCTTCTAGATTTCACTGTCTCAAACCGAATGTCACTTCTAGATTCCAATGTCTCAAACCGAATGTCACTTCTAGATTCCACGGTCTCTAACCGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCACTTCTAGATTCCACTGTCTATAACTGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCACTTCTAGATTCCAATGTCTCAAACCGAATGTCACTTCTAGATTCCACTGTCTCAAACCGAATGTCACTTCTAGATTCCACGGTCTCTAACCGAATGTCACTTCTAGATTCCACGGTCTCTAACCGAATGTCACTTCTAGATTCCACTGTCTCTAACCGAATGTCACTTCTAGATTCCGCTGTCTCTAACCGAATGTCACTTCTAGATTCCACTGTCTCTAACTGAATGTCACTTCTAATAATAATGAGTGATGCTTTTTATTAGCATGTACAGTAAGTAAACAAGTCTAACTGGCCAAGTTGTAATTGGATAAAGCTTAGCTTGCATTTCAAGAGctccatttttttttaatgcaatCTCAACATGTGGCTAGGATTGCCAACAGCTGAGTCTGTCTTATTGAGAAAAATGAACAATTACATCATGTATGGGGCATGTAAACTGAccgatctctatctctctctctctgcttatgGCAACAGTGTGGGTGGGCTGAAGAATTCAATGGCCTACCTCACATAATATGAATCAACAAATCTGGACAAAGGACAAAAATGACAGTATGAGTAAGTCATATTCTTTAAAAGGCATACGTACACAATGAATGTTtaaactatgtgtgtgtgtgtggtgtgttcctGTCTCTAGATAGCAGTGTAACTGTTACCAGTGGGTTAGCTAGCTACACACCAGTGAATCAGCTAGCTACAAACCAGTGGGTTAGCTAACTACAAACCAGTGGGTTAGCTAGCTACACCCCAGTGAATCAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACACCCCAGTGAATCAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACACACCAGTGGGTTAGCTAGCTACACCCCAGTGAATCAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACAAACCAGTGGGTTAGCTAGCTACAAACCAATGGGTTAGCTAGCTACAAACCAGGGAATCGGCTAGCTACACACCAATGAATCAGCTAGCTACAAACTAGTGAATCAacgagttagctagctacaaaccAGTGGGTTAGTTAGCTAAACACCAGTGAATCAGCTAACTAAACACCATTAAATCAGCTAGCTACAAACCAgtgagttagctagctacaagcCAGTCGGTCAGCTAGCTACAAACCAGTCGGTCAGCTAGCTACAAACCAGTCGGTCAGCTAGCTACAAACCAGTCGGTTAGCTAGCTACAAACCTCAACActgcagtacagagagagaacatgttgaTGTTATTGTTTTCCAGACCAGAAACTACTGAAAGTTGGATTAGTTGTAATGACGGTCACCTTGGACACGTCGCGACCTCTTGCCAGGGTTGGGGTTATTTCCCTTTCAATTCAGCCAAACGCAGAAAGTTAACTGAAATTCAAATTTTCCCCAATCAAAGCCCATGAGGAAAATTGTAAATTTTGAATGTCACagattgactgaattgaaatggaattgactccaGCCTTGCCTCTTACCACACCTTCACCTACAAGTCATgtgctgtatagggaatagggtgctatgtgGGAGGTATAATAAGATCAAACAGCAAGGCTTGTTAGTGCCAGCCTCCTTCAGCCCTACACCCCTCCCCTCCGTCTAATCCCTCTtggccctccccttcctctttctccttccatTCCCGTTGTCCACCCCCGACGACCTCTCCTTTGCCTCCACCttgccccccaccaccaccacccccgctcCGTTCCCCAGTCCCTTGGACAGCCCGTTGGAGACCCAGTTGTTAGACAGAGCCTTGGCGGCCTTGGGCTCCCTGGGTTGGCGCGGCGTGCGGCGATACGTCTGGTAGTAGAAGTTACCGAACAGGGCGATGAAGGTGAGGGCGTAGCAGATAAGGGCATAGTGCATCCAGTGGGGAAACTCACAGTCCATGTAGAGGGACAGAGCAGTGTGGCCGATGGTAACATGGAACTGGAC

Function

NR:

description
PREDICTED: uncharacterized protein PB18E9.04c-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130088 False 3756 lncRNA 0.41 8 11269455 11278174
TU130089 True 3651 lncRNA 0.43 3 11272763 11276574

Neighbor

gene id symbol gene type direction distance location
prelid3a LOC106593866 coding downstream 7946 11196145 ~ 11261793 (-)
lratd2b LOC106573048 coding downstream 100817 11165113 ~ 11168638 (-)
LOC118937688 NA coding downstream 209982 11058263 ~ 11060049 (-)
LOC110511734 LOC105023503 coding downstream 268333 10840566 ~ 11001122 (-)
LOC118937685 NA coding downstream 388065 10879856 ~ 10881390 (-)
LOC110514530 LOC106572903 coding upstream 119918 11398092 ~ 11402862 (-)
LOC110513475 LOC106592216 coding upstream 193765 11471939 ~ 12290710 (-)
LOC118937712 NA coding upstream 306034 11584208 ~ 11585455 (-)
LOC118937710 NA coding upstream 307385 11585559 ~ 11586577 (-)
LOC118937716 NA coding upstream 681105 11959279 ~ 11960863 (-)
G113693 NA non-coding downstream 34286 11234735 ~ 11235169 (-)
G113680 NA non-coding downstream 55585 11189088 ~ 11213870 (-)
G113675 NA non-coding downstream 90726 11174887 ~ 11178729 (-)
G113673 NA non-coding downstream 97099 11172152 ~ 11172356 (-)
G113701 NA non-coding upstream 1131 11279305 ~ 11286148 (-)
G113716 NA non-coding upstream 39691 11317865 ~ 11318567 (-)
G113721 NA non-coding upstream 47556 11325730 ~ 11326367 (-)
G113725 NA non-coding upstream 57796 11335970 ~ 11337267 (-)
G113727 NA non-coding upstream 60422 11338596 ~ 11339113 (-)
G113688 NA other downstream 51301 11210473 ~ 11218154 (-)
G113096 NA other downstream 247721 11021041 ~ 11021734 (-)
eif3h LOC100196680 other downstream 461211 10736729 ~ 10808244 (-)
G112965 NA other downstream 550797 10648265 ~ 10718658 (-)
G112928 NA other downstream 698647 10570442 ~ 10570808 (-)
G113712 NA other upstream 32669 11310843 ~ 11312658 (-)
G113720 NA other upstream 44867 11323041 ~ 11325612 (-)
G113733 LOC106606124 other upstream 71168 11349342 ~ 11352741 (-)
G114390 NA other upstream 1305853 12584027 ~ 12585140 (-)

Expression


Co-expression Network