G113258


Basic Information

Item Value
gene id G113258
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11311160 ~ 11312084 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU129450
CTCTATATGTCATAGGGTGGTACCTGAAGGTAATGTTGTCTAGACTATATGTCATAGGGTGTGACCTGAAGGTAATGTTGTCTAGACTCTATATGTCATAAGGTAATGTTGTCTAGACTCTATATGTCATAGGGTTTGACCTGAAGGTAATGTTGTCTAGACTCTATTTGTCATAAGGTAATGTTGTCTAGACTCTATATGTCATAGGGTGTGACCTGAAGGTAATGTTGTCTAGACTCTATTTGTCATAAGGTAATGTTGTCTAGACTCTATATCTCATAGGTTGTCTAGACTTTgtctgctgtaaactgtggacgttatgaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129450 True 326 lncRNA 0.42 3 11311160 11312084

Neighbor

gene id symbol gene type direction distance location
LOC118944054 NA coding upstream 33603 11274681 ~ 11277557 (+)
elovl4a LOC106606161 coding upstream 35680 11260912 ~ 11275480 (+)
fbxo32 fbxo32 coding upstream 68086 11227497 ~ 11243074 (+)
LOC110512016 LOC106564714 coding upstream 99948 11202887 ~ 11211212 (+)
nsmce2 LOC106606151 coding upstream 213696 11084361 ~ 11097464 (+)
soga3a LOC106593623 coding downstream 15942 11328026 ~ 11373000 (+)
echdc1 echdc1 coding downstream 80858 11392942 ~ 11397308 (+)
fbxo43 fbxo43 coding downstream 90859 11402943 ~ 11413713 (+)
LOC110510416 LOC106596421 coding downstream 104122 11416206 ~ 11459325 (+)
LOC110511179 NA coding downstream 987455 12299517 ~ 12300453 (+)
G113256 NA non-coding upstream 5611 11304280 ~ 11305549 (+)
G113197 NA non-coding upstream 10878 11273121 ~ 11300282 (+)
G113241 NA non-coding upstream 51101 11259739 ~ 11260059 (+)
G113238 NA non-coding upstream 56656 11253868 ~ 11254504 (+)
G113200 NA non-coding upstream 63804 11245613 ~ 11247356 (+)
G113265 NA non-coding downstream 24430 11336514 ~ 11337268 (+)
G113276 NA non-coding downstream 49228 11361312 ~ 11368100 (+)
G113278 NA non-coding downstream 63866 11375950 ~ 11376160 (+)
G113279 NA non-coding downstream 67051 11379135 ~ 11379439 (+)
G112697 NA other upstream 485097 10811518 ~ 10826063 (+)
LOC118937659 NA other upstream 1534709 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 1587289 9701990 ~ 9742723 (+)
G113285 NA other downstream 102847 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 165892 11477976 ~ 11482741 (+)
G113396 NA other downstream 396519 11708603 ~ 11709777 (+)
G114243 NA other downstream 1408324 12720408 ~ 12720693 (+)
G114244 NA other downstream 1408646 12720730 ~ 12721315 (+)

Expression


Co-expression Network