G113278


Basic Information

Item Value
gene id G113278
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11375950 ~ 11376160 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU129481
gcagacctGGGTTAAACACTACTTAAAATCTTTCAAATACCTTTTGAGTGTTTTCTCTAGCCTTCCTAGAGAGCCAGCTGTGTGGGGTTTATTGTTTTGGCACCTTTTCCTATTGGTCCGTTAAGCCAGGCAAGCTGaatgaaatgatttcaaatagtagttGAACCCAGGTGGTGGACAGACACCTGAGCCCAGGCTGTCTAAACTTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129481 True 211 lncRNA 0.45 1 11375950 11376160

Neighbor

gene id symbol gene type direction distance location
soga3a LOC106593623 coding upstream 2950 11328026 ~ 11373000 (+)
LOC110520740 LOC106592347 coding upstream 51143 11307174 ~ 11324807 (+)
LOC118944054 NA coding upstream 98393 11274681 ~ 11277557 (+)
elovl4a LOC106606161 coding upstream 100470 11260912 ~ 11275480 (+)
fbxo32 fbxo32 coding upstream 132876 11227497 ~ 11243074 (+)
echdc1 echdc1 coding downstream 16782 11392942 ~ 11397308 (+)
fbxo43 fbxo43 coding downstream 26783 11402943 ~ 11413713 (+)
LOC110510416 LOC106596421 coding downstream 40046 11416206 ~ 11459325 (+)
LOC110511179 NA coding downstream 923379 12299517 ~ 12300453 (+)
LOC118944185 NA coding downstream 1096080 12430935 ~ 12555437 (+)
G113276 NA non-coding upstream 7850 11361312 ~ 11368100 (+)
G113265 NA non-coding upstream 38682 11336514 ~ 11337268 (+)
G113258 NA non-coding upstream 63866 11311160 ~ 11312084 (+)
G113256 NA non-coding upstream 70401 11304280 ~ 11305549 (+)
G113279 NA non-coding downstream 2975 11379135 ~ 11379439 (+)
G113281 NA non-coding downstream 7938 11384098 ~ 11384386 (+)
G113282 NA non-coding downstream 14676 11390836 ~ 11391583 (+)
G113286 NA non-coding downstream 39348 11415508 ~ 11415786 (+)
G113292 NA non-coding downstream 46003 11422163 ~ 11422955 (+)
G112697 NA other upstream 549887 10811518 ~ 10826063 (+)
LOC118937659 NA other upstream 1599499 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 1652079 9701990 ~ 9742723 (+)
G113285 NA other downstream 38771 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 101816 11477976 ~ 11482741 (+)
G113396 NA other downstream 332443 11708603 ~ 11709777 (+)
G114243 NA other downstream 1344248 12720408 ~ 12720693 (+)
G114244 NA other downstream 1344570 12720730 ~ 12721315 (+)

Expression


Co-expression Network