G113279


Basic Information

Item Value
gene id G113279
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11379135 ~ 11379439 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU129482
GAGTCCTAGAGTCTGGAATGACTGGGGTAGGGCAGAGTCCCAGAGTCTGGAATGACTGGGATTGGGCAGAGTCCCAGAGTCTGGAACGACTGGGATAGGGCAGAGTCCCAGAGTCTGGAACGACTGGGATAGAGCAGAGTCCTAGAGTCTGGAACGACTGGGATAGGGCAGAGTCCCAGAGTCTGGAACGACTGGGATAGGGCAGAGTCCCAGAGTCTGGAACGACTGGGATAGGGCAGAGTCCCAGAGTCTGGAATGACTGGGATAGGGCAGAGTCCCAGAGTCTGGAAGGACTGGGATAGGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129482 True 305 lncRNA 0.47 1 11379135 11379439

Neighbor

gene id symbol gene type direction distance location
soga3a LOC106593623 coding upstream 6135 11328026 ~ 11373000 (+)
LOC110520740 LOC106592347 coding upstream 54328 11307174 ~ 11324807 (+)
LOC118944054 NA coding upstream 101578 11274681 ~ 11277557 (+)
elovl4a LOC106606161 coding upstream 103655 11260912 ~ 11275480 (+)
fbxo32 fbxo32 coding upstream 136061 11227497 ~ 11243074 (+)
echdc1 echdc1 coding downstream 13503 11392942 ~ 11397308 (+)
fbxo43 fbxo43 coding downstream 23504 11402943 ~ 11413713 (+)
LOC110510416 LOC106596421 coding downstream 36767 11416206 ~ 11459325 (+)
LOC110511179 NA coding downstream 920100 12299517 ~ 12300453 (+)
LOC118944185 NA coding downstream 1092801 12430935 ~ 12555437 (+)
G113278 NA non-coding upstream 2975 11375950 ~ 11376160 (+)
G113276 NA non-coding upstream 11035 11361312 ~ 11368100 (+)
G113265 NA non-coding upstream 41867 11336514 ~ 11337268 (+)
G113258 NA non-coding upstream 67051 11311160 ~ 11312084 (+)
G113281 NA non-coding downstream 4659 11384098 ~ 11384386 (+)
G113282 NA non-coding downstream 11397 11390836 ~ 11391583 (+)
G113286 NA non-coding downstream 36069 11415508 ~ 11415786 (+)
G113292 NA non-coding downstream 42724 11422163 ~ 11422955 (+)
G113305 LOC106595260 non-coding downstream 68163 11447602 ~ 11448392 (+)
G112697 NA other upstream 553072 10811518 ~ 10826063 (+)
LOC118937659 NA other upstream 1602684 9773574 ~ 9776807 (+)
LOC110506952 LOC106606100 other upstream 1655264 9701990 ~ 9742723 (+)
G113285 NA other downstream 35492 11414931 ~ 11415178 (+)
G113313 LOC102781083 other downstream 98537 11477976 ~ 11482741 (+)
G113396 NA other downstream 329164 11708603 ~ 11709777 (+)
G114243 NA other downstream 1340969 12720408 ~ 12720693 (+)
G114244 NA other downstream 1341291 12720730 ~ 12721315 (+)

Expression


Co-expression Network