G113328


Basic Information

Item Value
gene id G113328
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11507439 ~ 11511358 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU129587
tatgtacatgtaggtaggggtatgaggtagtatgtacatgtaggtaggggtatgaggtagtatgtacatgtaggtaggggtatgaggtagtagaggtagaatgtacatgtaggtaggggtatgaggtagtatgtacatgtaggtaggggtatgaggtagtatgtacatgtaggtaggggtatgaggtagtatgtacatgtaggtagggtatgaggtagtatgtacatgtaggtaggggtatgaggtagtatgtacatgtaggtaggggtatgaggtagcatgtacatgtaggtaggggtatgaggtagtatgtacatgtaggtagaggtatgaggtaatatgtacatgtaggtaggggt
>TU129588
tatgtacatgtaggtaggggtatgaggtagtatgtacatgtaggtaggggtatgaggtagtatgtacatgtaggtaggggtatgaggtagtagaggtagaatgtacatgtaggtaggggtatgaggtagtatgtacatgtaggtaggggtatgaggtagtatgtacatgtaggtaggggtatgaggtagtatgtacatgtaggtagggtatgaggtagtatgtacatgtaggtaggggtatgaggtagtatgtacatgtaggtaggggtatgaggtagcatgtacatgtaggtaggggtatgaggtaatatgtacatgtaggtaggggtatgaggtagtatgtacatgtaggtaggggtatgaggtagtatgtacatgtaggtaggggtatgaggtagtagaggtagtatgtacatgtaggtaggggtatgaggtagtatgtacatgtaggtaggggtatgagg

Function

NR:

description
PREDICTED: basic salivary proline-rich protein 1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129587 False 359 lncRNA 0.46 3 11507439 11510358
TU129588 True 464 lncRNA 0.47 3 11507439 11511358

Neighbor

gene id symbol gene type direction distance location
LOC110510416 LOC106596421 coding upstream 49008 11416206 ~ 11459325 (+)
fbxo43 fbxo43 coding upstream 93726 11402943 ~ 11413713 (+)
echdc1 echdc1 coding upstream 110131 11392942 ~ 11397308 (+)
soga3a LOC106593623 coding upstream 134439 11328026 ~ 11373000 (+)
LOC110520740 LOC106592347 coding upstream 182632 11307174 ~ 11324807 (+)
LOC110511179 NA coding downstream 788181 12299517 ~ 12300453 (+)
LOC118944185 NA coding downstream 960882 12430935 ~ 12555437 (+)
LOC110513835 nipal2 coding downstream 1050979 12562337 ~ 12616197 (+)
LOC110510520 rida coding downstream 1162727 12674085 ~ 12680150 (+)
spag1b LOC106592835 coding downstream 1205216 12716574 ~ 12776832 (+)
G113323 NA non-coding upstream 9269 11497712 ~ 11498170 (+)
G113288 NA non-coding upstream 51585 11452796 ~ 11455854 (+)
G113305 LOC106595260 non-coding upstream 59047 11447602 ~ 11448392 (+)
G113292 NA non-coding upstream 84484 11422163 ~ 11422955 (+)
G113334 NA non-coding downstream 14368 11525726 ~ 11526083 (+)
G113339 LOC106593525 non-coding downstream 33098 11544456 ~ 11545199 (+)
G113343 NA non-coding downstream 36177 11547535 ~ 11548604 (+)
G113344 vps13b non-coding downstream 40188 11551546 ~ 11552270 (+)
G113348 NA non-coding downstream 46167 11557525 ~ 11558379 (+)
G113313 LOC102781083 other upstream 24698 11477976 ~ 11482741 (+)
G113285 NA other upstream 92261 11414931 ~ 11415178 (+)
elovl4a LOC106606161 other upstream 234439 11260912 ~ 11275480 (+)
fbxo32 fbxo32 other upstream 264370 11227497 ~ 11243074 (+)
G112697 NA other upstream 681376 10811518 ~ 10826063 (+)
G113396 NA other downstream 197245 11708603 ~ 11709777 (+)
G114243 NA other downstream 1209050 12720408 ~ 12720693 (+)
G114244 NA other downstream 1209372 12720730 ~ 12721315 (+)
G114263 NA other downstream 1250874 12762232 ~ 12762827 (+)
G114323 NA other downstream 1438002 12949360 ~ 12964930 (+)

Expression


Co-expression Network