G113334


Basic Information

Item Value
gene id G113334
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11525726 ~ 11526083 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU129594
GTCTCCTAAATGAAAAACATTTTTTCAAGCTTTCAAATAGGCCAATTCTCCTTCTCTTCTGTCCCCTGCAACTCTTCCCCaggtccttagtgtacaagagacagcagtgcacacacacacacacagtacctgtCTGTGTCCTTGCTGACGTAGGGCCATGGAGGCTGGCTGTTGTTCTTCAGACCGTAGAAGTCTGCCAGTATGTGGTCCTGGCTGTCCTCCAACCCAGCCTGGTTCCTGTTCACTATCTGTTTGATCACACTGGTGGAGATGGGCACCGCACAGTGAGACGCATCCTCGTCCTCact

Function

NR:

description
PREDICTED: vacuolar protein sorting-associated protein 13B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129594 True 308 lncRNA 0.42 2 11525726 11526083

Neighbor

gene id symbol gene type direction distance location
LOC110510416 LOC106596421 coding upstream 67295 11416206 ~ 11459325 (+)
fbxo43 fbxo43 coding upstream 112013 11402943 ~ 11413713 (+)
echdc1 echdc1 coding upstream 128418 11392942 ~ 11397308 (+)
soga3a LOC106593623 coding upstream 152726 11328026 ~ 11373000 (+)
LOC110520740 LOC106592347 coding upstream 200919 11307174 ~ 11324807 (+)
LOC110511179 NA coding downstream 773456 12299517 ~ 12300453 (+)
LOC118944185 NA coding downstream 946157 12430935 ~ 12555437 (+)
LOC110513835 nipal2 coding downstream 1036254 12562337 ~ 12616197 (+)
LOC110510520 rida coding downstream 1148002 12674085 ~ 12680150 (+)
spag1b LOC106592835 coding downstream 1190491 12716574 ~ 12776832 (+)
G113311 LOC106593635 non-coding upstream 1518 11469788 ~ 11524208 (+)
G113328 NA non-coding upstream 14368 11507439 ~ 11511358 (+)
G113323 NA non-coding upstream 27556 11497712 ~ 11498170 (+)
G113288 NA non-coding upstream 69872 11452796 ~ 11455854 (+)
G113339 LOC106593525 non-coding downstream 18373 11544456 ~ 11545199 (+)
G113343 NA non-coding downstream 21452 11547535 ~ 11548604 (+)
G113344 vps13b non-coding downstream 25463 11551546 ~ 11552270 (+)
G113348 NA non-coding downstream 31442 11557525 ~ 11558379 (+)
G113350 NA non-coding downstream 37924 11564007 ~ 11564528 (+)
G113313 LOC102781083 other upstream 42985 11477976 ~ 11482741 (+)
G113285 NA other upstream 110548 11414931 ~ 11415178 (+)
elovl4a LOC106606161 other upstream 252726 11260912 ~ 11275480 (+)
fbxo32 fbxo32 other upstream 282657 11227497 ~ 11243074 (+)
G112697 NA other upstream 699663 10811518 ~ 10826063 (+)
G113396 NA other downstream 182520 11708603 ~ 11709777 (+)
G114243 NA other downstream 1194325 12720408 ~ 12720693 (+)
G114244 NA other downstream 1194647 12720730 ~ 12721315 (+)
G114263 NA other downstream 1236149 12762232 ~ 12762827 (+)
G114323 NA other downstream 1423277 12949360 ~ 12964930 (+)

Expression


Co-expression Network