G113806


Basic Information

Item Value
gene id G113806
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11536833 ~ 11539732 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU130344
AACTAACACTATCCTCTAAcaccatcctctaactaacaccatcctctaactaacaccCTCCTCTAACTAACATCGTCCTCTAACTAACACCGTCCTCTAACACCGTCCTCTAACTAACACCGTCCTCTAACTAACACCGTCCTCTAACTAACACCGTCCTCTAACTAACACGATCCTCTAAcaccatcctctaactaacaccatcctctaactaataccatcctctaactaacatcgtcctctaactaacaccatcctctaacaccatcctctaactaacaccgtcctctaacaccatcctctaactaacaccatcctctaacaccatcctctaactaacaccgTCCTCTAACTAATaccatcctctaactaacaccgtcctctaactaacaccatcctctaacaccatcctctaactaacaccatcctctaactaacaccatcctctaactaacaTCGTCCTCTAACTAACACCGTCCTCTAACACCGTCCTCTAACTAACACCGTCCTCTAACTAACACCATCCTCTAACTAATaccatcctctaactaacaccatcctctaactaacaccatcctctaactaacaccatcctctaactaacaccatcctctaactaacaccgTCCTCTAACTAACACCGTCCTCTAACTAACACCGTCCTCTAACTAAAACCGTCCTCTAACTAAcaccatcctctaactaacaccatcctctaactaacaccatcctctaactaacaccatcctctaactaacaccatcctctaactaacaccgtcctctaactaacaccgtcctctaactaacaccatcctctaactaacaccgtcctctaactaacaccatcctctaactaacaccgtcctctaactaacaccatcctctaactaacaccatcctctaactaacaccatcctctaactaacaccgtcctctaactaacaccgtcctctaactaacaccatcctctaacaccatcctctaacaccatcctctaactaacatcatcctctaactaacaccatcctctaacaccatcctctaactaacatcatcctctaactaacaccatcctctaactaacaccatcctctaactaacaccctcctctaactaacaccatcctctaactaacaccatcctctaactaacaccatcctctaactaacaccgtcctctaactaacaccgtcctctaactaacaccatcctctaacaccatcctctaactaacaccatcctctaacaccatcctctaactaacaccatcctctaacaccatcctctaactaacaccatCCTCTAATTAACACCCTCCTCTAACTAAcaccatcctctaactaacaccatcctctaactaacaccctcctctaactaacaccatcctctaacaccgtcctctaactaacaccgtcctctaactaacaccgtcctctaactaacaccgtcctctaactaacaccttcctctaactaacaccgtcctctaactaacaccatcctctaactaacaccgTCCTCTAACTAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130344 True 1529 lncRNA 0.45 4 11536833 11539732

Neighbor

gene id symbol gene type direction distance location
LOC110514530 LOC106572903 coding downstream 133971 11398092 ~ 11402862 (-)
prelid3a LOC106593866 coding downstream 275324 11196145 ~ 11261793 (-)
lratd2b LOC106573048 coding downstream 368195 11165113 ~ 11168638 (-)
LOC118937688 NA coding downstream 477360 11058263 ~ 11060049 (-)
LOC118937685 NA coding downstream 655443 10879856 ~ 10881390 (-)
LOC118937712 NA coding upstream 44476 11584208 ~ 11585455 (-)
LOC118937710 NA coding upstream 45827 11585559 ~ 11586577 (-)
LOC118937716 NA coding upstream 419547 11959279 ~ 11960863 (-)
LOC118937715 NA coding upstream 421822 11961554 ~ 11962594 (-)
LOC118937706 NA coding upstream 545832 12085564 ~ 12089429 (-)
G113755 NA non-coding downstream 12625 11469765 ~ 11524208 (-)
G113800 NA non-coding downstream 19180 11517109 ~ 11517653 (-)
G113794 NA non-coding downstream 35053 11501385 ~ 11501780 (-)
G113790 NA non-coding downstream 42802 11493536 ~ 11494031 (-)
G113789 NA non-coding downstream 44233 11492331 ~ 11492600 (-)
LOC110513475 LOC106592216 non-coding upstream 6298 11471939 ~ 12290710 (-)
G113816 NA non-coding upstream 25656 11565388 ~ 11565829 (-)
G113818 NA non-coding upstream 33932 11573664 ~ 11575600 (-)
G113825 NA non-coding upstream 79488 11619220 ~ 11619517 (-)
G113826 NA non-coding upstream 80239 11619971 ~ 11620339 (-)
G113733 LOC106606124 other downstream 184092 11349342 ~ 11352741 (-)
G113720 NA other downstream 211221 11323041 ~ 11325612 (-)
G113712 NA other downstream 224175 11310843 ~ 11312658 (-)
G113688 NA other downstream 318679 11210473 ~ 11218154 (-)
G113096 NA other downstream 515099 11021041 ~ 11021734 (-)
G114390 NA other upstream 1044295 12584027 ~ 12585140 (-)
G114402 NA other upstream 1070937 12610669 ~ 12613680 (-)
G114424 NA other upstream 1168095 12707827 ~ 12709315 (-)
G114442 NA other upstream 1195582 12735314 ~ 12739157 (-)

Expression


Co-expression Network