G113343



Basic Information


Item Value
gene id G113343
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11547535 ~ 11548604 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU129613
cacttcctgtctgtctgtggtgacgACTCCACTAACTGGatcacttcctgtctgtctgtggtgacaACTCCACTAACTGGatcacttcctgtctgtctgtggtgacaACTCCACTAACTGGatcacttcctgtctgtctgtggtgacgACTCCACTAACTGGatcacttcctgtctgtctgtgatgacGACTCCACTACCTGGatcacttcctgtctgtctgtggtgacgACTCCACTACCTGGATcaattcctgtctgtctgtggtgacgACTCCACTAACTGGATAGGAAACAGGATGTAGTTCTCAGACTAGTGTTCCCGTGTCATTCAGCTGTCTCTTGATAAGGTGTGTCATTCAGCTGTCTCTTGATAAGGTGTGTCATTCAGCTGTCTCTTGATAAGGTGTGTCATTCAGCTGTCTCTTGATAAGGTGTGTCATTCAGCTGTCTCTTGATAAGGTGTGTCATTCAGCTGTCTCTTGATAAGGTAAAGGTGTGTCATTCAGCTGTCTCTTGATAAGGTGTGTCATTCAGCTGTCTCTTGATAAGGTGTGTCATTCAGCTGTCTCTTGATAAGGT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU129613 True 580 lncRNA 0.47 2 11547535 11548604

Neighbor


gene id symbol gene type direction distance location
LOC110510416 LOC106596421 coding upstream 89104 11416206 ~ 11459325 (+)
fbxo43 fbxo43 coding upstream 133822 11402943 ~ 11413713 (+)
echdc1 echdc1 coding upstream 150227 11392942 ~ 11397308 (+)
soga3a LOC106593623 coding upstream 174535 11328026 ~ 11373000 (+)
LOC110520740 LOC106592347 coding upstream 222728 11307174 ~ 11324807 (+)
LOC110511179 NA coding downstream 750935 12299517 ~ 12300453 (+)
LOC118944185 NA coding downstream 923636 12430935 ~ 12555437 (+)
LOC110513835 nipal2 coding downstream 1013733 12562337 ~ 12616197 (+)
LOC110510520 rida coding downstream 1125481 12674085 ~ 12680150 (+)
spag1b LOC106592835 coding downstream 1167970 12716574 ~ 12776832 (+)
G113339 LOC106593525 non-coding upstream 2336 11544456 ~ 11545199 (+)
G113334 NA non-coding upstream 21452 11525726 ~ 11526083 (+)
G113311 LOC106593635 non-coding upstream 23327 11469788 ~ 11524208 (+)
G113328 NA non-coding upstream 36177 11507439 ~ 11511358 (+)
G113323 NA non-coding upstream 49365 11497712 ~ 11498170 (+)
G113344 vps13b non-coding downstream 2942 11551546 ~ 11552270 (+)
G113348 NA non-coding downstream 8921 11557525 ~ 11558379 (+)
G113350 NA non-coding downstream 15403 11564007 ~ 11564528 (+)
G113340 NA non-coding downstream 16706 11565310 ~ 11565683 (+)
G113353 NA non-coding downstream 24206 11572810 ~ 11575573 (+)
G113313 LOC102781083 other upstream 64794 11477976 ~ 11482741 (+)
G113285 NA other upstream 132357 11414931 ~ 11415178 (+)
elovl4a LOC106606161 other upstream 274535 11260912 ~ 11275480 (+)
fbxo32 fbxo32 other upstream 304466 11227497 ~ 11243074 (+)
G112697 NA other upstream 721472 10811518 ~ 10826063 (+)
G113396 NA other downstream 159999 11708603 ~ 11709777 (+)
G114243 NA other downstream 1171804 12720408 ~ 12720693 (+)
G114244 NA other downstream 1172126 12720730 ~ 12721315 (+)
G114263 NA other downstream 1213628 12762232 ~ 12762827 (+)
G114323 NA other downstream 1400756 12949360 ~ 12964930 (+)

Expression



Co-expression Network