Gene
RNA
| Item | Value |
|---|---|
| gene id | G113348 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 11557525 ~ 11558379 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU129622 | False | 325 | lncRNA | 0.38 | 2 | 11557525 | 11558379 |
| TU129621 | True | 371 | lncRNA | 0.44 | 2 | 11557846 | 11558379 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510416 | LOC106596421 | coding | upstream | 99094 | 11416206 ~ 11459325 (+) |
| fbxo43 | fbxo43 | coding | upstream | 143812 | 11402943 ~ 11413713 (+) |
| echdc1 | echdc1 | coding | upstream | 160217 | 11392942 ~ 11397308 (+) |
| soga3a | LOC106593623 | coding | upstream | 184525 | 11328026 ~ 11373000 (+) |
| LOC110520740 | LOC106592347 | coding | upstream | 232718 | 11307174 ~ 11324807 (+) |
| LOC110511179 | NA | coding | downstream | 741160 | 12299517 ~ 12300453 (+) |
| LOC118944185 | NA | coding | downstream | 913861 | 12430935 ~ 12555437 (+) |
| LOC110513835 | nipal2 | coding | downstream | 1003958 | 12562337 ~ 12616197 (+) |
| LOC110510520 | rida | coding | downstream | 1115706 | 12674085 ~ 12680150 (+) |
| spag1b | LOC106592835 | coding | downstream | 1158195 | 12716574 ~ 12776832 (+) |
| G113344 | vps13b | non-coding | upstream | 5255 | 11551546 ~ 11552270 (+) |
| G113343 | NA | non-coding | upstream | 8921 | 11547535 ~ 11548604 (+) |
| G113339 | LOC106593525 | non-coding | upstream | 12326 | 11544456 ~ 11545199 (+) |
| G113334 | NA | non-coding | upstream | 31442 | 11525726 ~ 11526083 (+) |
| G113328 | NA | non-coding | upstream | 46167 | 11507439 ~ 11511358 (+) |
| G113350 | NA | non-coding | downstream | 5628 | 11564007 ~ 11564528 (+) |
| G113340 | NA | non-coding | downstream | 6931 | 11565310 ~ 11565683 (+) |
| G113353 | NA | non-coding | downstream | 14431 | 11572810 ~ 11575573 (+) |
| G113372 | NA | non-coding | downstream | 70568 | 11628947 ~ 11629987 (+) |
| G113373 | NA | non-coding | downstream | 71743 | 11630122 ~ 11630512 (+) |
| G113313 | LOC102781083 | other | upstream | 74784 | 11477976 ~ 11482741 (+) |
| G113285 | NA | other | upstream | 142347 | 11414931 ~ 11415178 (+) |
| elovl4a | LOC106606161 | other | upstream | 284525 | 11260912 ~ 11275480 (+) |
| fbxo32 | fbxo32 | other | upstream | 314456 | 11227497 ~ 11243074 (+) |
| G112697 | NA | other | upstream | 731462 | 10811518 ~ 10826063 (+) |
| G113396 | NA | other | downstream | 150224 | 11708603 ~ 11709777 (+) |
| G114243 | NA | other | downstream | 1162029 | 12720408 ~ 12720693 (+) |
| G114244 | NA | other | downstream | 1162351 | 12720730 ~ 12721315 (+) |
| G114263 | NA | other | downstream | 1203853 | 12762232 ~ 12762827 (+) |
| G114323 | NA | other | downstream | 1390981 | 12949360 ~ 12964930 (+) |
