Gene
RNA
| Item | Value |
|---|---|
| gene id | G113353 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 11572810 ~ 11575573 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU129627 | False | 425 | lncRNA | 0.39 | 4 | 11572810 | 11575174 |
| TU129628 | True | 362 | lncRNA | 0.51 | 3 | 11573330 | 11575573 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510416 | LOC106596421 | coding | upstream | 114379 | 11416206 ~ 11459325 (+) |
| fbxo43 | fbxo43 | coding | upstream | 159097 | 11402943 ~ 11413713 (+) |
| echdc1 | echdc1 | coding | upstream | 175502 | 11392942 ~ 11397308 (+) |
| soga3a | LOC106593623 | coding | upstream | 199810 | 11328026 ~ 11373000 (+) |
| LOC110520740 | LOC106592347 | coding | upstream | 248003 | 11307174 ~ 11324807 (+) |
| LOC110511179 | NA | coding | downstream | 723966 | 12299517 ~ 12300453 (+) |
| LOC118944185 | NA | coding | downstream | 896667 | 12430935 ~ 12555437 (+) |
| LOC110513835 | nipal2 | coding | downstream | 986764 | 12562337 ~ 12616197 (+) |
| LOC110510520 | rida | coding | downstream | 1098512 | 12674085 ~ 12680150 (+) |
| spag1b | LOC106592835 | coding | downstream | 1141001 | 12716574 ~ 12776832 (+) |
| G113340 | NA | non-coding | upstream | 7127 | 11565310 ~ 11565683 (+) |
| G113350 | NA | non-coding | upstream | 8282 | 11564007 ~ 11564528 (+) |
| G113348 | NA | non-coding | upstream | 14431 | 11557525 ~ 11558379 (+) |
| G113344 | vps13b | non-coding | upstream | 20540 | 11551546 ~ 11552270 (+) |
| G113343 | NA | non-coding | upstream | 24206 | 11547535 ~ 11548604 (+) |
| G113372 | NA | non-coding | downstream | 53374 | 11628947 ~ 11629987 (+) |
| G113373 | NA | non-coding | downstream | 54549 | 11630122 ~ 11630512 (+) |
| G113384 | NA | non-coding | downstream | 87908 | 11663481 ~ 11663949 (+) |
| G113387 | NA | non-coding | downstream | 91025 | 11666598 ~ 11667653 (+) |
| G113392 | NA | non-coding | downstream | 104150 | 11679723 ~ 11681488 (+) |
| G113313 | LOC102781083 | other | upstream | 90069 | 11477976 ~ 11482741 (+) |
| G113285 | NA | other | upstream | 157632 | 11414931 ~ 11415178 (+) |
| elovl4a | LOC106606161 | other | upstream | 299810 | 11260912 ~ 11275480 (+) |
| fbxo32 | fbxo32 | other | upstream | 329741 | 11227497 ~ 11243074 (+) |
| G112697 | NA | other | upstream | 746747 | 10811518 ~ 10826063 (+) |
| G113396 | NA | other | downstream | 133030 | 11708603 ~ 11709777 (+) |
| G114243 | NA | other | downstream | 1144835 | 12720408 ~ 12720693 (+) |
| G114244 | NA | other | downstream | 1145157 | 12720730 ~ 12721315 (+) |
| G114263 | NA | other | downstream | 1186659 | 12762232 ~ 12762827 (+) |
| G114323 | NA | other | downstream | 1373787 | 12949360 ~ 12964930 (+) |
