G113372


Basic Information

Item Value
gene id G113372
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11628947 ~ 11629987 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU129647
CCCTAACAGTAGAGGTAGCAGTCTTCACCCTAACAGTAGAAGTACCAGTCTGTACCCTAACAGTAGAAGTACCAGTCTGTACCCTAACAGTAGAAGTACCAGTCTTCAGCCTAACAGTAGAAGTACCAGTCTGTACCCTAACAGTAGAGGTAGCAGTCTTCACCCTAACAGTAGAAGTACCAGTCTGTACCCTAACAGTAGAAGTACCAGTCTGTACCCTAACAGTAGAAGTACCAGTCTGTACCCTAACAGTAGAAGTACCAGTCTTCACCCTAACAGTAGAAGTAGCAGTCTGTACCCTAACAGTAGAAGTACCAGTCTGTACCCTAACAGTAGAAGTACCAGTCTGTACCCTAACAGTAGAAGTACCAGTCTTCACCCTAACAGTAGAAGTACCAGTCGATCCCTAACAGTAGAAGTACCAGTC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106569736 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129647 True 427 lncRNA 0.45 2 11628947 11629987

Neighbor

gene id symbol gene type direction distance location
LOC110510416 LOC106596421 coding upstream 170516 11416206 ~ 11459325 (+)
fbxo43 fbxo43 coding upstream 215234 11402943 ~ 11413713 (+)
echdc1 echdc1 coding upstream 231639 11392942 ~ 11397308 (+)
soga3a LOC106593623 coding upstream 255947 11328026 ~ 11373000 (+)
LOC110520740 LOC106592347 coding upstream 304140 11307174 ~ 11324807 (+)
LOC110511179 NA coding downstream 669552 12299517 ~ 12300453 (+)
LOC118944185 NA coding downstream 842253 12430935 ~ 12555437 (+)
LOC110513835 nipal2 coding downstream 932350 12562337 ~ 12616197 (+)
LOC110510520 rida coding downstream 1044098 12674085 ~ 12680150 (+)
spag1b LOC106592835 coding downstream 1086587 12716574 ~ 12776832 (+)
G113353 NA non-coding upstream 53374 11572810 ~ 11575573 (+)
G113340 NA non-coding upstream 63264 11565310 ~ 11565683 (+)
G113350 NA non-coding upstream 64419 11564007 ~ 11564528 (+)
G113348 NA non-coding upstream 70568 11557525 ~ 11558379 (+)
G113344 vps13b non-coding upstream 76677 11551546 ~ 11552270 (+)
G113373 NA non-coding downstream 135 11630122 ~ 11630512 (+)
G113384 NA non-coding downstream 33494 11663481 ~ 11663949 (+)
G113387 NA non-coding downstream 36611 11666598 ~ 11667653 (+)
G113392 NA non-coding downstream 49736 11679723 ~ 11681488 (+)
G113405 NA non-coding downstream 94596 11724583 ~ 11782799 (+)
G113313 LOC102781083 other upstream 146206 11477976 ~ 11482741 (+)
G113285 NA other upstream 213769 11414931 ~ 11415178 (+)
elovl4a LOC106606161 other upstream 355947 11260912 ~ 11275480 (+)
fbxo32 fbxo32 other upstream 385878 11227497 ~ 11243074 (+)
G112697 NA other upstream 802884 10811518 ~ 10826063 (+)
G113396 NA other downstream 78616 11708603 ~ 11709777 (+)
G114243 NA other downstream 1090421 12720408 ~ 12720693 (+)
G114244 NA other downstream 1090743 12720730 ~ 12721315 (+)
G114263 NA other downstream 1132245 12762232 ~ 12762827 (+)
G114323 NA other downstream 1319373 12949360 ~ 12964930 (+)

Expression


Co-expression Network