G113373



Basic Information


Item Value
gene id G113373
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11630122 ~ 11630512 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU129648
CCCTAACAGTAGAAGTACCAGTCGATCCCTAACAGTAGAAGTACCAGTCGACCCCTAACAGTCATTAAAGTGATGAATAACCAGTAAGAGGTCATTAGGGTGATGAATAACCAGTAGAGGTCATTAGTAGAGGTCATTAGAGTGATGAATAACCAGTAGAGGTAGAGGTCATTAGGGTGAGGTCATTAGGGTGATGAATAACCAGTAGAGGTCATTAGTAGAGGTCATTAGAGTGATGAATAACCAGTAGAGGTCATTAGGGTGAGATCATTAGGGTGATGAATGACAGTATGGGGAAAATGTTTGGTCTCATCAGATCTCTGACAGAAAGGTGGACTAACTCTATGTTACTGAATTAGGGTGAGAAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU129648 True 368 lncRNA 0.41 2 11630122 11630512

Neighbor


gene id symbol gene type direction distance location
LOC110510416 LOC106596421 coding upstream 171691 11416206 ~ 11459325 (+)
fbxo43 fbxo43 coding upstream 216409 11402943 ~ 11413713 (+)
echdc1 echdc1 coding upstream 232814 11392942 ~ 11397308 (+)
soga3a LOC106593623 coding upstream 257122 11328026 ~ 11373000 (+)
LOC110520740 LOC106592347 coding upstream 305315 11307174 ~ 11324807 (+)
LOC110511179 NA coding downstream 669027 12299517 ~ 12300453 (+)
LOC118944185 NA coding downstream 841728 12430935 ~ 12555437 (+)
LOC110513835 nipal2 coding downstream 931825 12562337 ~ 12616197 (+)
LOC110510520 rida coding downstream 1043573 12674085 ~ 12680150 (+)
spag1b LOC106592835 coding downstream 1086062 12716574 ~ 12776832 (+)
G113372 NA non-coding upstream 135 11628947 ~ 11629987 (+)
G113353 NA non-coding upstream 54549 11572810 ~ 11575573 (+)
G113340 NA non-coding upstream 64439 11565310 ~ 11565683 (+)
G113350 NA non-coding upstream 65594 11564007 ~ 11564528 (+)
G113348 NA non-coding upstream 71743 11557525 ~ 11558379 (+)
G113384 NA non-coding downstream 32969 11663481 ~ 11663949 (+)
G113387 NA non-coding downstream 36086 11666598 ~ 11667653 (+)
G113392 NA non-coding downstream 49211 11679723 ~ 11681488 (+)
G113405 NA non-coding downstream 94071 11724583 ~ 11782799 (+)
G113413 NA non-coding downstream 108586 11739098 ~ 11739672 (+)
G113313 LOC102781083 other upstream 147381 11477976 ~ 11482741 (+)
G113285 NA other upstream 214944 11414931 ~ 11415178 (+)
elovl4a LOC106606161 other upstream 357122 11260912 ~ 11275480 (+)
fbxo32 fbxo32 other upstream 387053 11227497 ~ 11243074 (+)
G112697 NA other upstream 804059 10811518 ~ 10826063 (+)
G113396 NA other downstream 78091 11708603 ~ 11709777 (+)
G114243 NA other downstream 1089896 12720408 ~ 12720693 (+)
G114244 NA other downstream 1090218 12720730 ~ 12721315 (+)
G114263 NA other downstream 1131720 12762232 ~ 12762827 (+)
G114323 NA other downstream 1318848 12949360 ~ 12964930 (+)

Expression



Co-expression Network