G113853


Basic Information

Item Value
gene id G113853
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11675428 ~ 11677051 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU130402
CTATAAtataccactataatacaccactataattcaccactataatacacctgTATAATACACCCCTGTAATACACCTGTATTATACACTACTATAATACACCTGTATAAtcaccactataatacaccactataatacaccactataatgcaccactataatacaccactataatacaccactataatacaccactataatacacctgtataatacaccactataatacaccactataatacaccactataatacacctgtataatacaccactataatacaccactataatacaccactataatacaccactataatacacctgtataatacaccactataatacaccactataatacaccactataatTCACCACTgtaatacaccactataatacaccactataatacaccactataataaACCACTATAATACctttataatacaccactataatacaccactataattcaccactataatacaccac
>TU130403
CTATAAtataccactataatacaccactataattcaccactataatacacctgTATAATACACCCCTGTAATACACCTGTATTATACACTACTATAATACACCTGTATAAtcaccactataatacaccactataatacaccactataatgcaccactataatacaccactataatacaccactataatacaccactataatacacctgtataatacaccactataatacaccactataatacaccactataatacacctgtataatacaccactataatacaccactataatacaccactataatacaccactataatacacctgtataatacaccactataatacaccactataatacaccactataatTCACCACTgtaatacaccactataatacaccactataatacaccactataataaACCACTATAATACctttataatacaccactataatatACCACTATAAtataccactatatacaccactataattcaccactataatacacctgTATAATACACCCCTGTAATACACCTGTATTATACACTACTATAATACACCTGTATAAtcaccactataatacaccactataatacaccactataatgcaccactataatacaccactataatacaccactataatacaccactataatacacctgtataatacaccactataatacaccactataatacacctgtataatacaccactataatacaccactataatacaccactataatacaccactataatTCACCACTgtaatacaccactataatacaccactataatacaccactataataaACCACTATAATACCTGTATAATACACCACtatattacaccactataatacaccactataatacaccactataatacaccactgtaatacaccactataatacaccactgtaatacaccactataatacaccactataatacaccactataataccagtataatacaccactataatacaccactataatacac

Function

NR:

description
uncharacterized protein LOC110491270, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130402 False 492 lncRNA 0.36 3 11675428 11677051
TU130403 True 1016 lncRNA 0.39 2 11675776 11677051

Neighbor

gene id symbol gene type direction distance location
LOC118937710 NA coding downstream 88851 11585559 ~ 11586577 (-)
LOC118937712 NA coding downstream 89973 11584208 ~ 11585455 (-)
LOC110514530 LOC106572903 coding downstream 272566 11398092 ~ 11402862 (-)
prelid3a LOC106593866 coding downstream 413919 11196145 ~ 11261793 (-)
lratd2b LOC106573048 coding downstream 506790 11165113 ~ 11168638 (-)
LOC118937716 NA coding upstream 282228 11959279 ~ 11960863 (-)
LOC118937715 NA coding upstream 284503 11961554 ~ 11962594 (-)
LOC118937706 NA coding upstream 408513 12085564 ~ 12089429 (-)
osr2 LOC106591507 coding upstream 622877 12299928 ~ 12304950 (-)
LOC118944056 NA coding upstream 758418 12435469 ~ 12445157 (-)
G113848 NA non-coding downstream 6985 11666856 ~ 11668443 (-)
G113840 NA non-coding downstream 28529 11646605 ~ 11646899 (-)
G113829 NA non-coding downstream 50886 11624078 ~ 11624542 (-)
G113826 NA non-coding downstream 55089 11619971 ~ 11620339 (-)
G113825 NA non-coding downstream 55911 11619220 ~ 11619517 (-)
G113854 NA non-coding upstream 290 11677341 ~ 11677774 (-)
G113858 NA non-coding upstream 11024 11688075 ~ 11688555 (-)
G113870 NA non-coding upstream 52502 11729553 ~ 11730005 (-)
G113876 NA non-coding upstream 61415 11738466 ~ 11738807 (-)
G113878 NA non-coding upstream 67588 11744639 ~ 11745549 (-)
LOC110513475 LOC106592216 other downstream 16760 11471939 ~ 12290710 (-)
G113733 LOC106606124 other downstream 322687 11349342 ~ 11352741 (-)
G113720 NA other downstream 349816 11323041 ~ 11325612 (-)
G113712 NA other downstream 362770 11310843 ~ 11312658 (-)
G113688 NA other downstream 457274 11210473 ~ 11218154 (-)
G114390 NA other upstream 906976 12584027 ~ 12585140 (-)
G114402 NA other upstream 933618 12610669 ~ 12613680 (-)
G114424 NA other upstream 1030776 12707827 ~ 12709315 (-)
G114442 NA other upstream 1058263 12735314 ~ 12739157 (-)
LOC110507534 LOC106606051 other upstream 1415041 13086169 ~ 13094428 (-)

Expression


Co-expression Network