G113405


Basic Information

Item Value
gene id G113405
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11724583 ~ 11782799 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU129681
AACCAGCCCCACCTGTTGTACATGAAGGAGAAAACACTGATTCTGACACATCTGATTGGTCCCGTGGAGACCACAGCGCTCGGGACAAGAGGAACGGGAATGTGAGGAGAAAGCACCCTCTCTGCCCACCATATAAAACCATACAGATCCTCATCACTTCCTCATTAGAAGACAGAAACATACAGATCCTCATCACTTCCTCATTAGAAGACAGAAACATACAGATCCTCATCACTTCCTCATTAGAAGACAGAAACATACAGATCCTCATCACTTCCTCATTAGAAGACAGAAACATACAGATCCTCATCACTTCCTCATTAGAAGACAGAAACATACAGATCCTCATCACTTCCTCATTAGAAGACAGAAACATACAGATCCTCATCACTTCCTCATTAGAAGACAGAAACATACAGATCCTCATCACTTCCTCATTAGAAGACAGAAACATACAGATCCTCATCACTTCCTCATTAGAAGACAGAAACATACAGATCCTCATCACTTCCTCATTCTAGGGCTAGAAGACAGAAAcatacagagaagaagaacagccCAGCGCAGGTGAACCCTTCTCCTCTGGCTCTCACATCTCTTTACCAACCATCTGACGtgggaaatacagagagaaattAAAATTACGAGTCATTACTGAcacaaacagagggagggagatgcagagagagacagagagagagagagagagagagagacagagagagag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106570465 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129681 True 727 lncRNA 0.45 2 11724583 11782799

Neighbor

gene id symbol gene type direction distance location
LOC110510416 LOC106596421 coding upstream 266152 11416206 ~ 11459325 (+)
fbxo43 fbxo43 coding upstream 310870 11402943 ~ 11413713 (+)
echdc1 echdc1 coding upstream 327275 11392942 ~ 11397308 (+)
soga3a LOC106593623 coding upstream 351583 11328026 ~ 11373000 (+)
LOC110520740 LOC106592347 coding upstream 399776 11307174 ~ 11324807 (+)
LOC110511179 NA coding downstream 516740 12299517 ~ 12300453 (+)
LOC118944185 NA coding downstream 689441 12430935 ~ 12555437 (+)
LOC110513835 nipal2 coding downstream 779538 12562337 ~ 12616197 (+)
LOC110510520 rida coding downstream 891286 12674085 ~ 12680150 (+)
spag1b LOC106592835 coding downstream 933775 12716574 ~ 12776832 (+)
G113392 NA non-coding upstream 43095 11679723 ~ 11681488 (+)
G113387 NA non-coding upstream 56930 11666598 ~ 11667653 (+)
G113384 NA non-coding upstream 60634 11663481 ~ 11663949 (+)
G113373 NA non-coding upstream 94071 11630122 ~ 11630512 (+)
G113372 NA non-coding upstream 94596 11628947 ~ 11629987 (+)
G113445 NA non-coding downstream 51566 11834365 ~ 11836686 (+)
G113455 NA non-coding downstream 67785 11850584 ~ 11851024 (+)
G113459 NA non-coding downstream 91213 11874012 ~ 11874418 (+)
G113460 NA non-coding downstream 92551 11875350 ~ 11875751 (+)
G113469 NA non-coding downstream 106406 11889205 ~ 11889672 (+)
G113396 NA other upstream 14806 11708603 ~ 11709777 (+)
G113313 LOC102781083 other upstream 241842 11477976 ~ 11482741 (+)
G113285 NA other upstream 309405 11414931 ~ 11415178 (+)
elovl4a LOC106606161 other upstream 451583 11260912 ~ 11275480 (+)
fbxo32 fbxo32 other upstream 481514 11227497 ~ 11243074 (+)
G114243 NA other downstream 937609 12720408 ~ 12720693 (+)
G114244 NA other downstream 937931 12720730 ~ 12721315 (+)
G114263 NA other downstream 979433 12762232 ~ 12762827 (+)
G114323 NA other downstream 1166561 12949360 ~ 12964930 (+)
LOC110520769 LOC106593286 other downstream 1839178 13604304 ~ 13623972 (+)

Expression


Co-expression Network