G113888



Basic Information


Item Value
gene id G113888
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11773484 ~ 11773886 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU130442
TCTGACCTGGGTCTCTGTTAGTGTGGAGAGAGTGGTCGTTACCCCCAGGTGTTGAGTAGTTTGGGCTCTGACCTGGGTCTCTGTTAGTGTGGAGAGAGTGGTCGTTACCCCCAGGTGTTGAGTAGTTTGGGCTCTGACCTGGGTCTCTGTTAGTGTGGAGAGAGTGGTCGTTACCCCCAGGTGTTGAGTAGTTTGGGCTCTGACC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU130442 True 205 lncRNA 0.55 2 11773484 11773886

Neighbor


gene id symbol gene type direction distance location
LOC118937710 NA coding downstream 186907 11585559 ~ 11586577 (-)
LOC118937712 NA coding downstream 188029 11584208 ~ 11585455 (-)
LOC110514530 LOC106572903 coding downstream 370622 11398092 ~ 11402862 (-)
prelid3a LOC106593866 coding downstream 511975 11196145 ~ 11261793 (-)
lratd2b LOC106573048 coding downstream 604846 11165113 ~ 11168638 (-)
LOC118937716 NA coding upstream 185393 11959279 ~ 11960863 (-)
LOC118937715 NA coding upstream 187668 11961554 ~ 11962594 (-)
LOC118937706 NA coding upstream 311678 12085564 ~ 12089429 (-)
osr2 LOC106591507 coding upstream 526042 12299928 ~ 12304950 (-)
LOC118944056 NA coding upstream 661583 12435469 ~ 12445157 (-)
G113878 NA non-coding downstream 27935 11744639 ~ 11745549 (-)
G113876 NA non-coding downstream 34677 11738466 ~ 11738807 (-)
G113870 NA non-coding downstream 43479 11729553 ~ 11730005 (-)
G113858 NA non-coding downstream 84929 11688075 ~ 11688555 (-)
G113854 NA non-coding downstream 95710 11677341 ~ 11677774 (-)
G113918 NA non-coding upstream 78135 11852021 ~ 11852646 (-)
G113926 NA non-coding upstream 105758 11879644 ~ 11880517 (-)
G113933 NA non-coding upstream 123709 11897595 ~ 11897936 (-)
G113948 NA non-coding upstream 154454 11928340 ~ 11929614 (-)
G113964 NA non-coding upstream 184794 11958680 ~ 11962352 (-)
LOC110513475 LOC106592216 other downstream 114816 11471939 ~ 12290710 (-)
G113733 LOC106606124 other downstream 420743 11349342 ~ 11352741 (-)
G113720 NA other downstream 447872 11323041 ~ 11325612 (-)
G113712 NA other downstream 460826 11310843 ~ 11312658 (-)
G113688 NA other downstream 555330 11210473 ~ 11218154 (-)
G114390 NA other upstream 810141 12584027 ~ 12585140 (-)
G114402 NA other upstream 836783 12610669 ~ 12613680 (-)
G114424 NA other upstream 933941 12707827 ~ 12709315 (-)
G114442 NA other upstream 961428 12735314 ~ 12739157 (-)
LOC110507534 LOC106606051 other upstream 1318206 13086169 ~ 13094428 (-)

Expression



Co-expression Network