G113432


Basic Information

Item Value
gene id G113432
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11779245 ~ 11780182 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU129709
attccctacatagagcactactttagaccaggaccctattccctacatagtgcactactttagaccagaaccctattccctacatagtgcactactttagaccagagccctattccctacatagtgcactactttagaccagaaccctattccctacatagtgcactactttagaccagaaccctattccctatatagtgcactactttagaccagaaccctattccctacatagtgcactactttagaccagagccctattccctacatagtgcactactttagaccagaaccctattccctacatagtgcactactttagaccagaaccctattccctacctagtgcactactttagaccagaaccctattccctacatagtgcactactttagaccagaaccctattccctacatagtgcactactttagaccagaaccctattccctatatagtgcactactatagaccagggccctattccccacatagtgcactactttagaccagaaccctattccctacatagtgcactactttagaccagaaccctattccctacatagtgcactactttagaccagaaccctattccctacctag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106562210, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129709 True 605 lncRNA 0.47 3 11779245 11780182

Neighbor

gene id symbol gene type direction distance location
LOC110510416 LOC106596421 coding upstream 320814 11416206 ~ 11459325 (+)
fbxo43 fbxo43 coding upstream 365532 11402943 ~ 11413713 (+)
echdc1 echdc1 coding upstream 381937 11392942 ~ 11397308 (+)
soga3a LOC106593623 coding upstream 406245 11328026 ~ 11373000 (+)
LOC110520740 LOC106592347 coding upstream 454438 11307174 ~ 11324807 (+)
LOC110511179 NA coding downstream 519357 12299517 ~ 12300453 (+)
LOC118944185 NA coding downstream 692058 12430935 ~ 12555437 (+)
LOC110513835 nipal2 coding downstream 782155 12562337 ~ 12616197 (+)
LOC110510520 rida coding downstream 893903 12674085 ~ 12680150 (+)
spag1b LOC106592835 coding downstream 936392 12716574 ~ 12776832 (+)
G113413 NA non-coding upstream 39573 11739098 ~ 11739672 (+)
G113392 NA non-coding upstream 97757 11679723 ~ 11681488 (+)
G113387 NA non-coding upstream 111592 11666598 ~ 11667653 (+)
G113384 NA non-coding upstream 115296 11663481 ~ 11663949 (+)
G113373 NA non-coding upstream 148733 11630122 ~ 11630512 (+)
G113445 NA non-coding downstream 54183 11834365 ~ 11836686 (+)
G113455 NA non-coding downstream 70402 11850584 ~ 11851024 (+)
G113459 NA non-coding downstream 93830 11874012 ~ 11874418 (+)
G113460 NA non-coding downstream 95168 11875350 ~ 11875751 (+)
G113469 NA non-coding downstream 109023 11889205 ~ 11889672 (+)
G113396 NA other upstream 69468 11708603 ~ 11709777 (+)
G113313 LOC102781083 other upstream 296504 11477976 ~ 11482741 (+)
G113285 NA other upstream 364067 11414931 ~ 11415178 (+)
elovl4a LOC106606161 other upstream 506245 11260912 ~ 11275480 (+)
fbxo32 fbxo32 other upstream 536176 11227497 ~ 11243074 (+)
G114243 NA other downstream 940226 12720408 ~ 12720693 (+)
G114244 NA other downstream 940548 12720730 ~ 12721315 (+)
G114263 NA other downstream 982050 12762232 ~ 12762827 (+)
G114323 NA other downstream 1169178 12949360 ~ 12964930 (+)
LOC110520769 LOC106593286 other downstream 1841795 13604304 ~ 13623972 (+)

Expression


Co-expression Network