Gene
RNA
| Item | Value |
|---|---|
| gene id | G113455 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 11850584 ~ 11851024 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106511736 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU129736 | True | 268 | lncRNA | 0.44 | 2 | 11850584 | 11851024 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510416 | LOC106596421 | coding | upstream | 392153 | 11416206 ~ 11459325 (+) |
| fbxo43 | fbxo43 | coding | upstream | 436871 | 11402943 ~ 11413713 (+) |
| echdc1 | echdc1 | coding | upstream | 453276 | 11392942 ~ 11397308 (+) |
| soga3a | LOC106593623 | coding | upstream | 477584 | 11328026 ~ 11373000 (+) |
| LOC110520740 | LOC106592347 | coding | upstream | 525777 | 11307174 ~ 11324807 (+) |
| LOC110511179 | NA | coding | downstream | 448515 | 12299517 ~ 12300453 (+) |
| LOC118944185 | NA | coding | downstream | 621216 | 12430935 ~ 12555437 (+) |
| LOC110513835 | nipal2 | coding | downstream | 711313 | 12562337 ~ 12616197 (+) |
| LOC110510520 | rida | coding | downstream | 823061 | 12674085 ~ 12680150 (+) |
| spag1b | LOC106592835 | coding | downstream | 865550 | 12716574 ~ 12776832 (+) |
| G113445 | NA | non-coding | upstream | 13898 | 11834365 ~ 11836686 (+) |
| G113405 | NA | non-coding | upstream | 67785 | 11724583 ~ 11782799 (+) |
| G113432 | NA | non-coding | upstream | 70402 | 11779245 ~ 11780182 (+) |
| G113413 | NA | non-coding | upstream | 110912 | 11739098 ~ 11739672 (+) |
| G113392 | NA | non-coding | upstream | 169096 | 11679723 ~ 11681488 (+) |
| G113459 | NA | non-coding | downstream | 22988 | 11874012 ~ 11874418 (+) |
| G113460 | NA | non-coding | downstream | 24326 | 11875350 ~ 11875751 (+) |
| G113469 | NA | non-coding | downstream | 38181 | 11889205 ~ 11889672 (+) |
| G113473 | NA | non-coding | downstream | 45027 | 11896051 ~ 11896903 (+) |
| G113482 | NA | non-coding | downstream | 54536 | 11905560 ~ 11905931 (+) |
| G113396 | NA | other | upstream | 140807 | 11708603 ~ 11709777 (+) |
| G113313 | LOC102781083 | other | upstream | 367843 | 11477976 ~ 11482741 (+) |
| G113285 | NA | other | upstream | 435406 | 11414931 ~ 11415178 (+) |
| elovl4a | LOC106606161 | other | upstream | 577584 | 11260912 ~ 11275480 (+) |
| fbxo32 | fbxo32 | other | upstream | 607515 | 11227497 ~ 11243074 (+) |
| G114243 | NA | other | downstream | 869384 | 12720408 ~ 12720693 (+) |
| G114244 | NA | other | downstream | 869706 | 12720730 ~ 12721315 (+) |
| G114263 | NA | other | downstream | 911208 | 12762232 ~ 12762827 (+) |
| G114323 | NA | other | downstream | 1098336 | 12949360 ~ 12964930 (+) |
| LOC110520769 | LOC106593286 | other | downstream | 1770953 | 13604304 ~ 13623972 (+) |
