G113473



Basic Information


Item Value
gene id G113473
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11896051 ~ 11896903 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU129758
GTTGTTGTGAAGAGAAATAGCAGGCTGGGATACTTCTGGGATGACGAACATAACCCTGAGCTGACCTGGGTCACCATGAAGTGGTCTATTATCGCCACATTCTAATCTGAACCTGTTTTACATCGTtgtcctctaatcagggactggtttagacctgggacaccaggtgggtgattcccctctaatcagggcctgatttagacctgggacaccaggtgggtgattcccctctaatcagggcctgatttagacctgggacaccaggtgggtgattcccctctaatcagggactggtttagacctgggacaccaggtgggtgattcccctctaatcagggcctgatttagacctgggacaccaggtgggtgattcccctgtaatcagggactgatttagacctgggacaccaggtgggtgattcccctctaatcagggcctgatatagacctgggacaccaggtgggtgattcccctctaatcagggactgatttagacctgggacaccatgtgggtgattcccctctaatcagggcctgatttagacctgggacaccaggtgggtgattcccctgtaatcagggcctgatttagacctgggacaccaggtgggtgattcccctctaatcagggcctgatttagacctgggacaccagg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU129758 True 657 lncRNA 0.58 2 11896051 11896903

Neighbor


gene id symbol gene type direction distance location
LOC110510416 LOC106596421 coding upstream 437620 11416206 ~ 11459325 (+)
fbxo43 fbxo43 coding upstream 482338 11402943 ~ 11413713 (+)
echdc1 echdc1 coding upstream 498743 11392942 ~ 11397308 (+)
soga3a LOC106593623 coding upstream 523051 11328026 ~ 11373000 (+)
LOC110520740 LOC106592347 coding upstream 571244 11307174 ~ 11324807 (+)
LOC110511179 NA coding downstream 402636 12299517 ~ 12300453 (+)
LOC118944185 NA coding downstream 575337 12430935 ~ 12555437 (+)
LOC110513835 nipal2 coding downstream 665434 12562337 ~ 12616197 (+)
LOC110510520 rida coding downstream 777182 12674085 ~ 12680150 (+)
spag1b LOC106592835 coding downstream 819671 12716574 ~ 12776832 (+)
G113469 NA non-coding upstream 6379 11889205 ~ 11889672 (+)
G113460 NA non-coding upstream 20300 11875350 ~ 11875751 (+)
G113459 NA non-coding upstream 21633 11874012 ~ 11874418 (+)
G113455 NA non-coding upstream 45027 11850584 ~ 11851024 (+)
G113445 NA non-coding upstream 59365 11834365 ~ 11836686 (+)
G113482 NA non-coding downstream 8657 11905560 ~ 11905931 (+)
G113489 NA non-coding downstream 19766 11916669 ~ 11917549 (+)
G113502 NA non-coding downstream 54776 11951679 ~ 11952049 (+)
G113503 NA non-coding downstream 55377 11952280 ~ 11953055 (+)
G113504 NA non-coding downstream 56461 11953364 ~ 11954667 (+)
G113396 NA other upstream 186274 11708603 ~ 11709777 (+)
G113313 LOC102781083 other upstream 413310 11477976 ~ 11482741 (+)
G113285 NA other upstream 480873 11414931 ~ 11415178 (+)
elovl4a LOC106606161 other upstream 623051 11260912 ~ 11275480 (+)
fbxo32 fbxo32 other upstream 652982 11227497 ~ 11243074 (+)
G114243 NA other downstream 823505 12720408 ~ 12720693 (+)
G114244 NA other downstream 823827 12720730 ~ 12721315 (+)
G114263 NA other downstream 865329 12762232 ~ 12762827 (+)
G114323 NA other downstream 1052457 12949360 ~ 12964930 (+)
LOC110520769 LOC106593286 other downstream 1725074 13604304 ~ 13623972 (+)

Expression



Co-expression Network