Gene
RNA
| Item | Value |
|---|---|
| gene id | G113552 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 12078668 ~ 12079653 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: adhesive plaque matrix protein-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU129864 | True | 585 | lncRNA | 0.52 | 6 | 12078668 | 12079653 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510416 | LOC106596421 | coding | upstream | 620237 | 11416206 ~ 11459325 (+) |
| fbxo43 | fbxo43 | coding | upstream | 664955 | 11402943 ~ 11413713 (+) |
| echdc1 | echdc1 | coding | upstream | 681360 | 11392942 ~ 11397308 (+) |
| soga3a | LOC106593623 | coding | upstream | 705668 | 11328026 ~ 11373000 (+) |
| LOC110520740 | LOC106592347 | coding | upstream | 753861 | 11307174 ~ 11324807 (+) |
| LOC110511179 | NA | coding | downstream | 219886 | 12299517 ~ 12300453 (+) |
| LOC118944185 | NA | coding | downstream | 392587 | 12430935 ~ 12555437 (+) |
| LOC110513835 | nipal2 | coding | downstream | 482684 | 12562337 ~ 12616197 (+) |
| LOC110510520 | rida | coding | downstream | 594432 | 12674085 ~ 12680150 (+) |
| spag1b | LOC106592835 | coding | downstream | 636921 | 12716574 ~ 12776832 (+) |
| G113543 | NA | non-coding | upstream | 16283 | 12061719 ~ 12062385 (+) |
| G113539 | NA | non-coding | upstream | 22969 | 12055271 ~ 12055699 (+) |
| G113536 | NA | non-coding | upstream | 37561 | 12040098 ~ 12041107 (+) |
| G113526 | NA | non-coding | upstream | 74503 | 12003728 ~ 12004165 (+) |
| G113518 | NA | non-coding | upstream | 99195 | 11977825 ~ 11979473 (+) |
| G113557 | NA | non-coding | downstream | 7735 | 12087388 ~ 12089042 (+) |
| G113559 | NA | non-coding | downstream | 9824 | 12089477 ~ 12090494 (+) |
| G113561 | NA | non-coding | downstream | 14176 | 12093829 ~ 12094222 (+) |
| G113570 | NA | non-coding | downstream | 32055 | 12111708 ~ 12112197 (+) |
| G113574 | NA | non-coding | downstream | 42281 | 12121934 ~ 12122983 (+) |
| G113396 | NA | other | upstream | 368891 | 11708603 ~ 11709777 (+) |
| G113313 | LOC102781083 | other | upstream | 595927 | 11477976 ~ 11482741 (+) |
| G113285 | NA | other | upstream | 663490 | 11414931 ~ 11415178 (+) |
| elovl4a | LOC106606161 | other | upstream | 805668 | 11260912 ~ 11275480 (+) |
| fbxo32 | fbxo32 | other | upstream | 835599 | 11227497 ~ 11243074 (+) |
| G114243 | NA | other | downstream | 640755 | 12720408 ~ 12720693 (+) |
| G114244 | NA | other | downstream | 641077 | 12720730 ~ 12721315 (+) |
| G114263 | NA | other | downstream | 682579 | 12762232 ~ 12762827 (+) |
| G114323 | NA | other | downstream | 869707 | 12949360 ~ 12964930 (+) |
| LOC110520769 | LOC106593286 | other | downstream | 1542324 | 13604304 ~ 13623972 (+) |
