Gene
RNA
| Item | Value |
|---|---|
| gene id | G114027 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 12107696 ~ 12112517 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU130652 | False | 296 | lncRNA | 0.47 | 3 | 12107696 | 12112517 |
| TU130650 | False | 217 | lncRNA | 0.50 | 2 | 12111733 | 12112205 |
| TU130653 | True | 217 | lncRNA | 0.50 | 2 | 12111733 | 12112517 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937706 | NA | coding | downstream | 18267 | 12085564 ~ 12089429 (-) |
| LOC118937715 | NA | coding | downstream | 145102 | 11961554 ~ 11962594 (-) |
| LOC118937716 | NA | coding | downstream | 146833 | 11959279 ~ 11960863 (-) |
| LOC118937710 | NA | coding | downstream | 521119 | 11585559 ~ 11586577 (-) |
| LOC118937712 | NA | coding | downstream | 522241 | 11584208 ~ 11585455 (-) |
| osr2 | LOC106591507 | coding | upstream | 187411 | 12299928 ~ 12304950 (-) |
| LOC118944056 | NA | coding | upstream | 322952 | 12435469 ~ 12445157 (-) |
| LOC118937718 | LOC106590816 | coding | upstream | 436782 | 12549299 ~ 12553519 (-) |
| LOC118944197 | NA | coding | upstream | 504989 | 12617506 ~ 12617694 (-) |
| pop1 | LOC106561139 | coding | upstream | 527185 | 12639702 ~ 12673874 (-) |
| G114017 | NA | non-coding | downstream | 26409 | 12080864 ~ 12081287 (-) |
| G113937 | NA | non-coding | downstream | 41435 | 12065836 ~ 12066261 (-) |
| G114002 | NA | non-coding | downstream | 52764 | 12054220 ~ 12054932 (-) |
| G114000 | NA | non-coding | downstream | 54948 | 12051624 ~ 12052748 (-) |
| G114030 | NA | non-coding | upstream | 8800 | 12121317 ~ 12189176 (-) |
| G114040 | NA | non-coding | upstream | 41535 | 12154052 ~ 12184375 (-) |
| G114044 | NA | non-coding | upstream | 65443 | 12177960 ~ 12178274 (-) |
| G114047 | NA | non-coding | upstream | 70638 | 12183155 ~ 12183710 (-) |
| G114049 | NA | non-coding | upstream | 77140 | 12189657 ~ 12193443 (-) |
| LOC110513475 | LOC106592216 | other | downstream | 449028 | 11471939 ~ 12290710 (-) |
| G113733 | LOC106606124 | other | downstream | 754955 | 11349342 ~ 11352741 (-) |
| G113720 | NA | other | downstream | 782084 | 11323041 ~ 11325612 (-) |
| G113712 | NA | other | downstream | 795038 | 11310843 ~ 11312658 (-) |
| G113688 | NA | other | downstream | 889542 | 11210473 ~ 11218154 (-) |
| G114390 | NA | other | upstream | 471510 | 12584027 ~ 12585140 (-) |
| G114402 | NA | other | upstream | 498152 | 12610669 ~ 12613680 (-) |
| G114424 | NA | other | upstream | 595310 | 12707827 ~ 12709315 (-) |
| G114442 | NA | other | upstream | 622797 | 12735314 ~ 12739157 (-) |
| LOC110507534 | LOC106606051 | other | upstream | 979575 | 13086169 ~ 13094428 (-) |
