G114345


Basic Information

Item Value
gene id G114345
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 12407008 ~ 12408829 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131179
acacggttagaaacagagaggagagaggagagagggacatgagagacACACgggcagaaacagagaggagagagggacatgagagacCCACGgttagaaacagagaggagagagagacatgagagacacacggttagaaacagagaggagagagagacatgagagacacacggttagaaacagagaggagagagagacatgagagacacacggttagaaacagagaggagagaggagagagggacatgatAGACACACgggcagaaacagagaggagagagggacatgagagacCCACGgttagaaacagagaggagagagggacacacGGTtagaaatagagaggagagagggacatgagagacacagttagaaacagagaggagagagggacatgagagacACACGGTTAGAaacaaagaggagagaggagagagggacatgagagacACACGgttagaaacagagaggagagaggagagagggagggagggacacacggttagaaacagagaggagagaggagagaggagagagggacatgagagacACATGGttagaaacagaggagagagagacatgagagacacATGgttagaaacagagaggagagagggacatgagagacacagttagaaacagagaggagagagggacatgagagacACATGgttagaaacagagaggagagagagacatgagagacacacgggcagaaacagagaggagagagggacatgagacACACACGgttagaaacagagaggagagaggagagaggagagagggacatgagagacACATGGttagaaacagaggagagagagacatgagagacacATGgttagaaacagagaggagagagggacatgagagacacagttagaaacagagaggagagagggacatgagagacACATGgttagaaacagagaggagagagagacatgagagacacacgggcagaaacagagaggagagagggacatgagagacACACgggcagaaacagagaggagagagggacatgagagacACACGgttagaaacagagaggagagaggagagagggacatgagagacatggttagaaacagagaggagagagagacatgagagacacacggttagaaacagagaggagagagggacatgagagacACACgggcagaaacagagaggagagagggacatgagagacACACggttagaaacagagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131179 True 1221 lncRNA 0.50 3 12407008 12408829

Neighbor

gene id symbol gene type direction distance location
osr2 LOC106591507 coding downstream 102058 12299928 ~ 12304950 (-)
LOC118937706 NA coding downstream 317579 12085564 ~ 12089429 (-)
LOC118937715 NA coding downstream 444414 11961554 ~ 11962594 (-)
LOC118937716 NA coding downstream 446145 11959279 ~ 11960863 (-)
LOC118937710 NA coding downstream 820431 11585559 ~ 11586577 (-)
LOC118944056 NA coding upstream 26640 12435469 ~ 12445157 (-)
LOC118937718 LOC106590816 coding upstream 140470 12549299 ~ 12553519 (-)
LOC118944197 NA coding upstream 208677 12617506 ~ 12617694 (-)
pop1 LOC106561139 coding upstream 230873 12639702 ~ 12673874 (-)
LOC118937724 NA coding upstream 274229 12683058 ~ 12683775 (-)
G114340 NA non-coding downstream 22855 12382090 ~ 12384153 (-)
G114108 NA non-coding downstream 64837 12341967 ~ 12342171 (-)
G114104 NA non-coding downstream 84283 12322519 ~ 12322725 (-)
G114075 NA non-coding downstream 132579 12271706 ~ 12274429 (-)
G114077 NA non-coding downstream 137187 12265543 ~ 12269821 (-)
G114336 NA non-coding upstream 15366 12424195 ~ 12428711 (-)
G114359 NA non-coding upstream 46933 12455762 ~ 12456037 (-)
G114361 NA non-coding upstream 53917 12462746 ~ 12464158 (-)
G114362 NA non-coding upstream 55736 12464565 ~ 12466400 (-)
G114364 NA non-coding upstream 65491 12474320 ~ 12475769 (-)
LOC110513475 LOC106592216 other downstream 748340 11471939 ~ 12290710 (-)
G113733 LOC106606124 other downstream 1054267 11349342 ~ 11352741 (-)
G113720 NA other downstream 1081396 11323041 ~ 11325612 (-)
G113712 NA other downstream 1094350 11310843 ~ 11312658 (-)
G113688 NA other downstream 1188854 11210473 ~ 11218154 (-)
G114390 NA other upstream 175198 12584027 ~ 12585140 (-)
G114402 NA other upstream 201840 12610669 ~ 12613680 (-)
G114424 NA other upstream 298998 12707827 ~ 12709315 (-)
G114442 NA other upstream 326485 12735314 ~ 12739157 (-)
LOC110507534 LOC106606051 other upstream 683263 13086169 ~ 13094428 (-)

Expression


Co-expression Network