G114336



Basic Information


Item Value
gene id G114336
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 12424195 ~ 12428711 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU131162
gtctgggatacatcctggtcagtagagggaaaagtatagtctgggctacatcctggtcagtagagggaacagtatagtctgggatacatcctggtcagtagagggaacagtatagtctgggctacatcctggtcagtagagggaacagtatagtctgggctacatcctggtcagtagagggaacagtatagtctgggatacatcctggttcagtagagggaacagtatagtctgggctacatcctggtcagtagagtgaacagtatagtctgggctacatcctggtcagtagagggaacagtatagtctgggctacatcctggtcagtagagggaacagtatagtctgggctacatcctggtcaatagagggaacagtatagtctgggatacatcctggtcagtagagggaacagtatagtctgggatacatcctggtcagtagagtgaacagtatagtctgggctacatcctggtcagtagagggaacagcatagtctgggatacatcctggtcagtagagggaaaagtatagtctgggctacatcctggtcagtagagggaacattATAGTCTGGgatacatcctggtcagtagagggaacagtatagtctgggctacatcctggtcagtagagggaacagtatagtagtctgggctacatcctggtcagtagagggaacaacatagtctgggctacatcctggtcagtagagggaacagtatagtctgggctatATCCTgttcagtagagggaacagcatagtctgggatacatcctgttcagtagagggaacagtatagtctgggc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU131162 True 810 lncRNA 0.43 4 12424195 12428711

Neighbor


gene id symbol gene type direction distance location
osr2 LOC106591507 coding downstream 119245 12299928 ~ 12304950 (-)
LOC118937706 NA coding downstream 334766 12085564 ~ 12089429 (-)
LOC118937715 NA coding downstream 461601 11961554 ~ 11962594 (-)
LOC118937716 NA coding downstream 463332 11959279 ~ 11960863 (-)
LOC118937710 NA coding downstream 837618 11585559 ~ 11586577 (-)
LOC118944056 NA coding upstream 6758 12435469 ~ 12445157 (-)
LOC118937718 LOC106590816 coding upstream 120588 12549299 ~ 12553519 (-)
LOC118944197 NA coding upstream 188795 12617506 ~ 12617694 (-)
pop1 LOC106561139 coding upstream 210991 12639702 ~ 12673874 (-)
LOC118937724 NA coding upstream 254347 12683058 ~ 12683775 (-)
G114345 NA non-coding downstream 15366 12407008 ~ 12408829 (-)
G114340 NA non-coding downstream 40042 12382090 ~ 12384153 (-)
G114108 NA non-coding downstream 82024 12341967 ~ 12342171 (-)
G114104 NA non-coding downstream 101470 12322519 ~ 12322725 (-)
G114075 NA non-coding downstream 149766 12271706 ~ 12274429 (-)
G114359 NA non-coding upstream 27051 12455762 ~ 12456037 (-)
G114361 NA non-coding upstream 34035 12462746 ~ 12464158 (-)
G114362 NA non-coding upstream 35854 12464565 ~ 12466400 (-)
G114364 NA non-coding upstream 45609 12474320 ~ 12475769 (-)
G114389 NA non-coding upstream 149148 12577859 ~ 12578364 (-)
LOC110513475 LOC106592216 other downstream 765527 11471939 ~ 12290710 (-)
G113733 LOC106606124 other downstream 1071454 11349342 ~ 11352741 (-)
G113720 NA other downstream 1098583 11323041 ~ 11325612 (-)
G113712 NA other downstream 1111537 11310843 ~ 11312658 (-)
G113688 NA other downstream 1206041 11210473 ~ 11218154 (-)
G114390 NA other upstream 155316 12584027 ~ 12585140 (-)
G114402 NA other upstream 181958 12610669 ~ 12613680 (-)
G114424 NA other upstream 279116 12707827 ~ 12709315 (-)
G114442 NA other upstream 306603 12735314 ~ 12739157 (-)
LOC110507534 LOC106606051 other upstream 663381 13086169 ~ 13094428 (-)

Expression



Co-expression Network