Gene
RNA
| Item | Value |
|---|---|
| gene id | G114192 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 12618605 ~ 12619236 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: uncharacterized protein LOC110513786, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU130917 | True | 632 | lncRNA | 0.53 | 1 | 12618605 | 12619236 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513835 | nipal2 | coding | upstream | 2408 | 12562337 ~ 12616197 (+) |
| LOC118944185 | NA | coding | upstream | 146175 | 12430935 ~ 12555437 (+) |
| LOC110511179 | NA | coding | upstream | 318648 | 12299517 ~ 12300453 (+) |
| LOC110510416 | LOC106596421 | coding | upstream | 1160174 | 11416206 ~ 11459325 (+) |
| fbxo43 | fbxo43 | coding | upstream | 1204892 | 11402943 ~ 11413713 (+) |
| LOC110510520 | rida | coding | downstream | 54849 | 12674085 ~ 12680150 (+) |
| spag1b | LOC106592835 | coding | downstream | 97338 | 12716574 ~ 12776832 (+) |
| LOC110525149 | LOC106589684 | coding | downstream | 294395 | 12913631 ~ 12916798 (+) |
| LOC118937726 | NA | coding | downstream | 307585 | 12926821 ~ 12927702 (+) |
| LOC110507515 | LOC106575761 | coding | downstream | 427643 | 13046879 ~ 13061306 (+) |
| G114191 | NA | non-coding | upstream | 15070 | 12602886 ~ 12603535 (+) |
| G114167 | NA | non-coding | upstream | 83259 | 12530852 ~ 12535346 (+) |
| G114161 | NA | non-coding | upstream | 142891 | 12474372 ~ 12475714 (+) |
| G114193 | NA | non-coding | downstream | 4072 | 12623308 ~ 12624145 (+) |
| G114194 | NA | non-coding | downstream | 4946 | 12624182 ~ 12624405 (+) |
| G114196 | NA | non-coding | downstream | 6482 | 12625718 ~ 12626847 (+) |
| G114197 | NA | non-coding | downstream | 9478 | 12628714 ~ 12628969 (+) |
| G114198 | NA | non-coding | downstream | 15509 | 12634745 ~ 12635162 (+) |
| G113396 | NA | other | upstream | 908828 | 11708603 ~ 11709777 (+) |
| G113313 | LOC102781083 | other | upstream | 1135864 | 11477976 ~ 11482741 (+) |
| G113285 | NA | other | upstream | 1203427 | 11414931 ~ 11415178 (+) |
| elovl4a | LOC106606161 | other | upstream | 1345605 | 11260912 ~ 11275480 (+) |
| fbxo32 | fbxo32 | other | upstream | 1375536 | 11227497 ~ 11243074 (+) |
| G114243 | NA | other | downstream | 101172 | 12720408 ~ 12720693 (+) |
| G114244 | NA | other | downstream | 101494 | 12720730 ~ 12721315 (+) |
| G114263 | NA | other | downstream | 142996 | 12762232 ~ 12762827 (+) |
| G114323 | NA | other | downstream | 330124 | 12949360 ~ 12964930 (+) |
| LOC110520769 | LOC106593286 | other | downstream | 1002741 | 13604304 ~ 13623972 (+) |
