Gene
RNA
| Item | Value |
|---|---|
| gene id | G114210 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 12657714 ~ 12658512 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ribonucleases P/MRP protein subunit POP1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU130936 | True | 769 | lncRNA | 0.38 | 2 | 12657714 | 12658512 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513835 | nipal2 | coding | upstream | 41517 | 12562337 ~ 12616197 (+) |
| LOC118944185 | NA | coding | upstream | 185284 | 12430935 ~ 12555437 (+) |
| LOC110511179 | NA | coding | upstream | 357757 | 12299517 ~ 12300453 (+) |
| LOC110510416 | LOC106596421 | coding | upstream | 1199283 | 11416206 ~ 11459325 (+) |
| fbxo43 | fbxo43 | coding | upstream | 1244001 | 11402943 ~ 11413713 (+) |
| LOC110510520 | rida | coding | downstream | 15573 | 12674085 ~ 12680150 (+) |
| spag1b | LOC106592835 | coding | downstream | 58062 | 12716574 ~ 12776832 (+) |
| LOC110525149 | LOC106589684 | coding | downstream | 255119 | 12913631 ~ 12916798 (+) |
| LOC118937726 | NA | coding | downstream | 268309 | 12926821 ~ 12927702 (+) |
| LOC110507515 | LOC106575761 | coding | downstream | 388367 | 13046879 ~ 13061306 (+) |
| G114209 | NA | non-coding | upstream | 78 | 12657259 ~ 12657636 (+) |
| G114208 | NA | non-coding | upstream | 1074 | 12656309 ~ 12656640 (+) |
| G114199 | NA | non-coding | upstream | 16565 | 12640691 ~ 12641149 (+) |
| G114198 | NA | non-coding | upstream | 22552 | 12634745 ~ 12635162 (+) |
| G114197 | NA | non-coding | upstream | 28745 | 12628714 ~ 12628969 (+) |
| G114217 | NA | non-coding | downstream | 15147 | 12673659 ~ 12673918 (+) |
| G114220 | NA | non-coding | downstream | 22921 | 12681433 ~ 12682686 (+) |
| G114221 | NA | non-coding | downstream | 24232 | 12682744 ~ 12685867 (+) |
| G114228 | NA | non-coding | downstream | 37668 | 12696180 ~ 12696433 (+) |
| G114234 | NA | non-coding | downstream | 57421 | 12715933 ~ 12716189 (+) |
| G113396 | NA | other | upstream | 947937 | 11708603 ~ 11709777 (+) |
| G113313 | LOC102781083 | other | upstream | 1174973 | 11477976 ~ 11482741 (+) |
| G113285 | NA | other | upstream | 1242536 | 11414931 ~ 11415178 (+) |
| elovl4a | LOC106606161 | other | upstream | 1384714 | 11260912 ~ 11275480 (+) |
| fbxo32 | fbxo32 | other | upstream | 1414645 | 11227497 ~ 11243074 (+) |
| G114243 | NA | other | downstream | 61896 | 12720408 ~ 12720693 (+) |
| G114244 | NA | other | downstream | 62218 | 12720730 ~ 12721315 (+) |
| G114263 | NA | other | downstream | 103720 | 12762232 ~ 12762827 (+) |
| G114323 | NA | other | downstream | 290848 | 12949360 ~ 12964930 (+) |
| LOC110520769 | LOC106593286 | other | downstream | 963465 | 13604304 ~ 13623972 (+) |
