G114217



Basic Information


Item Value
gene id G114217
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 12673659 ~ 12673918 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU130943
CATTGGGACATCATGCGactactttgcatgacacaaaCAGGCTACGCCAACGAGTTTTATGAAGTTATCCACTTCCATCACACCACAGTGTATTTGTAAAGGTAACTGAAAATATATTCACTTTCAAATCCTGAATGGAGGAACAGTGATATTTCAAAACCACGCCGTAAACTCACATTTACGTCTACAGCTCTTCCGCATAAATATGACGTATATCTTGTTCCGGTTAAATTGTGTTCATGGGAAACGTAGTATATAGt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU130943 True 260 lncRNA 0.43 1 12673659 12673918

Neighbor


gene id symbol gene type direction distance location
LOC110513835 nipal2 coding upstream 57462 12562337 ~ 12616197 (+)
LOC118944185 NA coding upstream 201229 12430935 ~ 12555437 (+)
LOC110511179 NA coding upstream 373702 12299517 ~ 12300453 (+)
LOC110510416 LOC106596421 coding upstream 1215228 11416206 ~ 11459325 (+)
fbxo43 fbxo43 coding upstream 1259946 11402943 ~ 11413713 (+)
LOC110510520 rida coding downstream 167 12674085 ~ 12680150 (+)
spag1b LOC106592835 coding downstream 42656 12716574 ~ 12776832 (+)
LOC110525149 LOC106589684 coding downstream 239713 12913631 ~ 12916798 (+)
LOC118937726 NA coding downstream 252903 12926821 ~ 12927702 (+)
LOC110507515 LOC106575761 coding downstream 372961 13046879 ~ 13061306 (+)
G114210 NA non-coding upstream 15147 12657714 ~ 12658512 (+)
G114209 NA non-coding upstream 16023 12657259 ~ 12657636 (+)
G114208 NA non-coding upstream 17019 12656309 ~ 12656640 (+)
G114199 NA non-coding upstream 32510 12640691 ~ 12641149 (+)
G114198 NA non-coding upstream 38497 12634745 ~ 12635162 (+)
G114220 NA non-coding downstream 7515 12681433 ~ 12682686 (+)
G114221 NA non-coding downstream 8826 12682744 ~ 12685867 (+)
G114228 NA non-coding downstream 22262 12696180 ~ 12696433 (+)
G114234 NA non-coding downstream 42015 12715933 ~ 12716189 (+)
G113396 NA other upstream 963882 11708603 ~ 11709777 (+)
G113313 LOC102781083 other upstream 1190918 11477976 ~ 11482741 (+)
G113285 NA other upstream 1258481 11414931 ~ 11415178 (+)
elovl4a LOC106606161 other upstream 1400659 11260912 ~ 11275480 (+)
fbxo32 fbxo32 other upstream 1430590 11227497 ~ 11243074 (+)
G114243 NA other downstream 46490 12720408 ~ 12720693 (+)
G114244 NA other downstream 46812 12720730 ~ 12721315 (+)
G114263 NA other downstream 88314 12762232 ~ 12762827 (+)
G114323 NA other downstream 275442 12949360 ~ 12964930 (+)
LOC110520769 LOC106593286 other downstream 948059 13604304 ~ 13623972 (+)

Expression



Co-expression Network