G114234


Basic Information

Item Value
gene id G114234
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 12715933 ~ 12716189 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU130976
agatactggtgtgcagaatagcagaaaagtaaataaaaacaatatggggatgaggtaggtagattgggtgggctatttacagatagactatgtacagctgcagcgattggttatctgctcagatagcagatgtttaaagttagtgagggaaatatacgtctccagcttcagcgatttttgcagttcgttccattCATACACTCTGGTGATTTCTCTTTCCCCAGTTTATAGTTCAAGTAACTTGGAATATATTACTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130976 True 257 lncRNA 0.39 1 12715933 12716189

Neighbor

gene id symbol gene type direction distance location
LOC110510520 rida coding upstream 35783 12674085 ~ 12680150 (+)
LOC110513835 nipal2 coding upstream 99736 12562337 ~ 12616197 (+)
LOC118944185 NA coding upstream 243503 12430935 ~ 12555437 (+)
LOC110511179 NA coding upstream 415976 12299517 ~ 12300453 (+)
LOC110510416 LOC106596421 coding upstream 1257502 11416206 ~ 11459325 (+)
spag1b LOC106592835 coding downstream 385 12716574 ~ 12776832 (+)
LOC110525149 LOC106589684 coding downstream 197442 12913631 ~ 12916798 (+)
LOC118937726 NA coding downstream 210632 12926821 ~ 12927702 (+)
LOC110507515 LOC106575761 coding downstream 330690 13046879 ~ 13061306 (+)
LOC118936508 ano10 coding downstream 476956 13193145 ~ 13241855 (+)
G114228 NA non-coding upstream 19500 12696180 ~ 12696433 (+)
G114221 NA non-coding upstream 30066 12682744 ~ 12685867 (+)
G114220 NA non-coding upstream 33247 12681433 ~ 12682686 (+)
G114217 NA non-coding upstream 42015 12673659 ~ 12673918 (+)
G114210 NA non-coding upstream 57421 12657714 ~ 12658512 (+)
G114248 NA non-coding downstream 14481 12730670 ~ 12731081 (+)
G114259 NA non-coding downstream 34659 12750848 ~ 12751314 (+)
G114268 NA non-coding downstream 53156 12769345 ~ 12769763 (+)
G114270 NA non-coding downstream 55994 12772183 ~ 12772913 (+)
G113396 NA other upstream 1006156 11708603 ~ 11709777 (+)
G113313 LOC102781083 other upstream 1233192 11477976 ~ 11482741 (+)
G113285 NA other upstream 1300755 11414931 ~ 11415178 (+)
elovl4a LOC106606161 other upstream 1442933 11260912 ~ 11275480 (+)
fbxo32 fbxo32 other upstream 1472864 11227497 ~ 11243074 (+)
G114243 NA other downstream 4219 12720408 ~ 12720693 (+)
G114244 NA other downstream 4541 12720730 ~ 12721315 (+)
G114263 NA other downstream 46043 12762232 ~ 12762827 (+)
G114323 NA other downstream 233171 12949360 ~ 12964930 (+)
LOC110520769 LOC106593286 other downstream 905788 13604304 ~ 13623972 (+)

Expression


Co-expression Network