G114450


Basic Information

Item Value
gene id G114450
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 12747829 ~ 12749050 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131328
ttattacacaggtcctcaggactgtccaatcctatcaaccagacacagagacagacattattacacaggtcctcaggactgtccaatcctatcaaccagacacagagacattatTACACAGGTCCTCAGGACTGTCCAGTCCTATcaaccagacacagagacattattacacaggtcctcaggactgtccaatcctatcaaccagacacagagacattattacacaggtcctcaggactgtccaatcctatcaaccagacacagagacattattacacaggtcctcaggactgtccaatcctatcaaccagacacagagacagacattaTTACACAGgtcctcaggactgtccaatcctatcaaccagacacagagacattattacacaggtcctcaggactgtccaatcctatcaaccagacacagagacattattacacaggtcctcaggactgtccaatcctatcaaccagacacagagacattatTACACAGGTCCTCAGGACTGTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131328 True 513 lncRNA 0.42 3 12747829 12749050

Neighbor

gene id symbol gene type direction distance location
LOC118937723 LOC106561136 coding downstream 32219 12683093 ~ 12715610 (-)
LOC118937724 NA coding downstream 64054 12683058 ~ 12683775 (-)
pop1 LOC106561139 coding downstream 73955 12639702 ~ 12673874 (-)
LOC118944197 NA coding downstream 130135 12617506 ~ 12617694 (-)
LOC118937718 LOC106590816 coding downstream 194310 12549299 ~ 12553519 (-)
LOC110525147 LOC106570794 coding upstream 64600 12813650 ~ 12890396 (-)
pabpc1a LOC106593394 coding upstream 175422 12924472 ~ 12934534 (-)
LOC118944179 NA coding upstream 176307 12925357 ~ 12925439 (-)
LOC110507522 LOC106606066 coding upstream 314040 13063090 ~ 13083743 (-)
LOC110507534 LOC106606051 coding upstream 337119 13086169 ~ 13094428 (-)
G114443 NA non-coding downstream 8070 12739242 ~ 12739759 (-)
G114436 NA non-coding downstream 22454 12723832 ~ 12725375 (-)
G114435 NA non-coding downstream 23107 12723462 ~ 12724722 (-)
G114433 NA non-coding downstream 29069 12718299 ~ 12718760 (-)
G114409 NA non-coding downstream 63918 12682779 ~ 12683911 (-)
G114454 NA non-coding upstream 3697 12752747 ~ 12753840 (-)
G114459 NA non-coding upstream 13167 12762217 ~ 12762981 (-)
G114477 NA non-coding upstream 61799 12810849 ~ 12811160 (-)
G114478 NA non-coding upstream 69070 12818120 ~ 12822908 (-)
G114442 NA other downstream 8672 12735314 ~ 12739157 (-)
G114424 NA other downstream 38514 12707827 ~ 12709315 (-)
G114402 NA other downstream 134149 12610669 ~ 12613680 (-)
G114390 NA other downstream 162689 12584027 ~ 12585140 (-)
LOC110513475 LOC106592216 other downstream 1089161 11471939 ~ 12290710 (-)
LOC110513400 snrk other upstream 546783 13250306 ~ 13324680 (-)
G114812 NA other upstream 581698 13330748 ~ 13332506 (-)
LOC110534058 LOC106593045 other upstream 745398 13494448 ~ 13500298 (-)
G114928 LOC106574568 other upstream 825485 13574535 ~ 13582606 (-)

Expression


Co-expression Network